AMTR_s00012p00230440 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.185

Description : Chromatin organisation.DNA methylation.canonical RNA-directed DNA methylation pathway.IDN/IDP regulatory protein


Gene families : OG_01_0000867 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000867_tree ,
OG_02_0000555 (LandPlants) Phylogenetic Tree(s): OG_02_0000555_tree ,
OG_03_0000747 (SeedPlants) Phylogenetic Tree(s): OG_03_0000747_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00230440
Cluster HCCA: Cluster_267

Target Alias Description ECC score Gene Family Method Actions
AT3G48670 RDM12, IDN2 XH/XS domain-containing protein 0.05 Archaeplastida
GSVIVT01010889001 No alias Chromatin organisation.DNA methylation.canonical... 0.04 Archaeplastida
MA_16249g0010 No alias Factor of DNA methylation 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp6g07340.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.03 Archaeplastida
Pp3c21_20330V3.1 No alias XH/XS domain-containing protein 0.02 Archaeplastida
Solyc06g076210.3.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.02 Archaeplastida
AT1G15910 No alias XH/XS domain-containing protein 0.02 LandPlants
AT3G48670 RDM12, IDN2 XH/XS domain-containing protein 0.04 LandPlants
GSVIVT01010889001 No alias Chromatin organisation.DNA methylation.canonical... 0.03 LandPlants
Mp6g07340.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.02 LandPlants
Pp3c21_20330V3.1 No alias XH/XS domain-containing protein 0.02 LandPlants
Solyc06g076210.3.1 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.02 LandPlants
Zm00001e016919_P001 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.02 LandPlants
Zm00001e020386_P003 No alias IDN/IDP regulatory protein of DNA methylation pathway 0.02 LandPlants
GSVIVT01010889001 No alias Chromatin organisation.DNA methylation.canonical... 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005381 Znf-XS_domain 43 83
IPR005379 Uncharacterised_XH 509 640
IPR005380 XS_domain 114 235
No external refs found!