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AT4G24270 (EMB140)


Aliases : EMB140

Description : EMBRYO DEFECTIVE 140


Gene families : OG_01_0005084 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005084_tree ,
OG_02_0004748 (LandPlants) Phylogenetic Tree(s): OG_02_0004748_tree ,
OG_03_0004954 (SeedPlants) Phylogenetic Tree(s): OG_03_0004954_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G24270
Cluster HCCA: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00099p00147110 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
Cre12.g546700 No alias No description available 0.03 Archaeplastida
LOC_Os08g02130.2 No alias no hits & (original description: none) 0.07 Archaeplastida
MA_183711g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp8g05890.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c2_22040V3.1 No alias EMBRYO DEFECTIVE 140 0.05 Archaeplastida
Smo402481 No alias No description available 0.05 Archaeplastida
Zm00001e029180_P005 No alias no hits & (original description: none) 0.07 Archaeplastida
AMTR_s00099p00147110 evm_27.TU.AmTr_v1... No description available 0.05 LandPlants
LOC_Os08g02130.2 No alias no hits & (original description: none) 0.05 LandPlants
MA_183711g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp8g05890.1 No alias no hits & (original description: none) 0.02 LandPlants
Pp3c2_22040V3.1 No alias EMBRYO DEFECTIVE 140 0.03 LandPlants
Smo402481 No alias No description available 0.05 LandPlants
Solyc01g102970.3.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e029180_P005 No alias no hits & (original description: none) 0.06 LandPlants
AMTR_s00099p00147110 evm_27.TU.AmTr_v1... No description available 0.05 SeedPlants
LOC_Os08g02130.2 No alias no hits & (original description: none) 0.06 SeedPlants
MA_183711g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc01g102970.3.1 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e029180_P005 No alias no hits & (original description: none) 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0009560 embryo sac egg cell differentiation RCA Interproscan
BP GO:0009793 embryo development ending in seed dormancy NAS Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008669 LSM_interact 797 815
IPR000504 RRM_dom 654 721
No external refs found!