AT4G24120 (ATYSL1, YSL1)


Aliases : ATYSL1, YSL1

Description : YELLOW STRIPE like 1


Gene families : OG_01_0000193 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000193_tree ,
OG_02_0000331 (LandPlants) Phylogenetic Tree(s): OG_02_0000331_tree ,
OG_03_0001892 (SeedPlants) Phylogenetic Tree(s): OG_03_0001892_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G24120
Cluster HCCA: Cluster_218

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00027p00045420 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.03 Archaeplastida
AMTR_s00029p00088380 evm_27.TU.AmTr_v1... Probable metal-nicotianamine transporter YSL5... 0.02 Archaeplastida
AMTR_s00029p00090440 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.03 Archaeplastida
AMTR_s00154p00062710 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 Archaeplastida
AMTR_s00154p00064240 evm_27.TU.AmTr_v1... Probable metal-nicotianamine transporter YSL6... 0.03 Archaeplastida
AMTR_s00154p00064710 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 Archaeplastida
AT5G24380 ATYSL2, YSL2 YELLOW STRIPE like 2 0.01 Archaeplastida
GSVIVT01012035001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
GSVIVT01012036001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.01 Archaeplastida
GSVIVT01029349001 No alias Nutrient uptake.iron uptake.chelation-based strategy... 0.04 Archaeplastida
Gb_23122 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Gb_27981 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Gb_27988 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
Gb_40333 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Gb_41263 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
LOC_Os02g42220.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_10431747g0010 No alias Probable metal-nicotianamine transporter YSL12 OS=Oryza... 0.01 Archaeplastida
MA_110581g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 Archaeplastida
MA_46073g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.05 Archaeplastida
MA_5416460g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp4g01710.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Pp3c1_9680V3.1 No alias YELLOW STRIPE like 6 0.02 Archaeplastida
Pp3c2_34990V3.1 No alias YELLOW STRIPE like 6 0.04 Archaeplastida
Zm00001e007544_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e008356_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e015193_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Archaeplastida
Zm00001e023053_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
Zm00001e031577_P001 No alias Probable metal-nicotianamine transporter YSL16 OS=Oryza... 0.03 Archaeplastida
Zm00001e033936_P001 No alias Probable metal-nicotianamine transporter YSL16 OS=Oryza... 0.03 Archaeplastida
Zm00001e041266_P002 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 Archaeplastida
AMTR_s00027p00045420 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.OPT... 0.02 LandPlants
Gb_40333 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 LandPlants
MA_46073g0010 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.03 LandPlants
Zm00001e008356_P001 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.02 LandPlants
Zm00001e015280_P004 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 LandPlants

Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IGI Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0006857 oligopeptide transport ISS Interproscan
BP GO:0010039 response to iron ion IEP Interproscan
BP GO:0048316 seed development IGI Interproscan
MF GO:0051980 iron-nicotianamine transmembrane transporter activity IGI Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004813 OPT 46 657
No external refs found!