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  5. Len_g44279

Len_g44279


Description : component *(uS10) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001982 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001982_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g44279

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00105050 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
AT3G45030 No alias Ribosomal protein S10p/S20e family protein 0.03 OrthoFinder output from all 47 species
AT3G47370 No alias Ribosomal protein S10p/S20e family protein 0.03 OrthoFinder output from all 47 species
AT5G62300 No alias Ribosomal protein S10p/S20e family protein 0.03 OrthoFinder output from all 47 species
Cre16.g660150 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
LOC_Os10g08930.1 LOC_Os10g08930 component RPS20 of SSU proteome 0.02 OrthoFinder output from all 47 species
MA_103406g0010 No alias component RPS20 of SSU proteome 0.03 OrthoFinder output from all 47 species
Msp_g24561 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Msp_g36291 No alias component *(uS10) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Smo115495 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.03 OrthoFinder output from all 47 species
Solyc01g096580.3.1 Solyc01g096580 component RPS20 of SSU proteome 0.04 OrthoFinder output from all 47 species
Zm00001e001045_P001 Zm00001e001045 component RPS20 of SSU proteome 0.03 OrthoFinder output from all 47 species
Zm00001e036579_P001 Zm00001e036579 component RPS20 of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR027486 Ribosomal_S10_dom 69 163
No external refs found!