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  5. Len_g44254

Len_g44254


Description : not classified & original description: none


Gene families : OG0001679 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001679_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g44254

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00196350 evm_27.TU.AmTr_v1... Putative ripening-related protein 2 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
AMTR_s00002p00197000 evm_27.TU.AmTr_v1... Putative ripening-related protein 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
AMTR_s00005p00207640 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
AMTR_s00005p00208720 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.06 OrthoFinder output from all 47 species
AMTR_s00005p00210680 evm_27.TU.AmTr_v1... Ripening-related protein grip22 OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
AMTR_s00011p00263200 evm_27.TU.AmTr_v1... Putative ripening-related protein 5 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Ala_g32825 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G075300.1 Ceric.32G075300 not classified & original description: pacid=50597616... 0.03 OrthoFinder output from all 47 species
Dcu_g26186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11809 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025223001 No alias Ripening-related protein grip22 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Gb_06385 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g42450.1 LOC_Os02g42450 Putative ripening-related protein 2 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os04g29550.1 LOC_Os04g29550 Putative ripening-related protein 1 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os06g02640.1 LOC_Os06g02640 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os10g34760.1 LOC_Os10g34760 Putative ripening-related protein 6 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
LOC_Os10g34770.1 LOC_Os10g34770 Putative ripening-related protein 7 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os10g34840.1 LOC_Os10g34840 Ripening-related protein 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os10g34902.1 LOC_Os10g34902 Putative ripening-related protein 4 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Len_g46928 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g36089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g13696 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28256 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g28257 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g29185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29186 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g29187 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35967 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g36438 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36439 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36946 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g38342 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g04962 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g21539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g33995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo410644 No alias No description available 0.02 OrthoFinder output from all 47 species
Smo430105 No alias No description available 0.02 OrthoFinder output from all 47 species
Spa_g32195 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g40808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e004506_P001 Zm00001e004506 Putative ripening-related protein 6 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005861 troponin complex IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:2001070 starch binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!