AMTR_s00012p00224800 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00012.174

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG_01_0000050 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000050_tree ,
OG_02_0000049 (LandPlants) Phylogenetic Tree(s): OG_02_0000049_tree ,
OG_03_0010475 (SeedPlants) Phylogenetic Tree(s): OG_03_0010475_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00012p00224800
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00122p00120860 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT1G59870 PEN3, ABCG36,... ABC-2 and Plant PDR ABC-type transporter family protein 0.03 Archaeplastida
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.03 Archaeplastida
AT4G15215 ATPDR13, PDR13 pleiotropic drug resistance 13 0.03 Archaeplastida
Cre12.g540650 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01017188001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
GSVIVT01036184001 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Gb_34645 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os01g08260.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
LOC_Os02g32690.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os11g37700.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
LOC_Os12g13720.1 No alias subfamily ABCG transporter 0.01 Archaeplastida
LOC_Os12g32820.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_135152g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_17319g0020 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_18770g0010 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g07030.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp2g21800.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c16_9600V3.1 No alias pleiotropic drug resistance 11 0.02 Archaeplastida
Pp3c5_3240V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.05 Archaeplastida
Smo115821 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo118688 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo99541 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc05g018510.3.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.03 Archaeplastida
Solyc05g055330.3.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Solyc06g065670.4.1 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.02 Archaeplastida
Solyc06g076930.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e024257_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e026148_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e040575_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
GSVIVT01017188001 No alias Solute transport.primary active transport.ABC... 0.02 LandPlants
GSVIVT01031380001 No alias Solute transport.primary active transport.ABC... 0.01 LandPlants
GSVIVT01036184001 No alias Solute transport.primary active transport.ABC... 0.02 LandPlants
MA_135152g0010 No alias subfamily ABCG transporter 0.02 LandPlants
Mp2g07030.1 No alias subfamily ABCG transporter 0.02 LandPlants
Pp3c16_9600V3.1 No alias pleiotropic drug resistance 11 0.02 LandPlants
Pp3c5_3240V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.03 LandPlants
Smo181756 No alias Solute transport.primary active transport.ABC... 0.01 LandPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013581 PDR_assoc 537 593
IPR013525 ABC_2_trans 321 532
IPR013525 ABC_2_trans 858 1045
No external refs found!