AT4G23860

Description : PHD finger protein-related

Gene families : OG_01_0005033 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005033_tree ,
OG_02_0005995 (LandPlants) Phylogenetic Tree(s): OG_02_0005995_tree ,
OG_03_0007903 (SeedPlants) Phylogenetic Tree(s): OG_03_0007903_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G23860
Cluster	HCCA: Cluster_253

Target	Alias	Description	ECC score	Gene Family Method
Gb_07681	No alias	no hits & (original description: none)	0.04	Archaeplastida
Gb_12978	No alias	no hits & (original description: none)	0.02	Archaeplastida
Gb_35688	No alias	no hits & (original description: none)	0.03	Archaeplastida
LOC_Os06g33810.1	No alias	no hits & (original description: none)	0.02	Archaeplastida
MA_927296g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Solyc08g082320.3.1	No alias	no hits & (original description: none)	0.03	Archaeplastida
Gb_07681	No alias	no hits & (original description: none)	0.04	LandPlants
LOC_Os06g33810.1	No alias	no hits & (original description: none)	0.02	LandPlants
MA_927296g0010	No alias	no hits & (original description: none)	0.02	LandPlants
Solyc08g082320.3.1	No alias	no hits & (original description: none)	0.02	LandPlants
Zm00001e030700_P001	No alias	no hits & (original description: none)	0.02	LandPlants
Gb_07681	No alias	no hits & (original description: none)	0.04	SeedPlants
LOC_Os06g33810.1	No alias	no hits & (original description: none)	0.02	SeedPlants
Solyc08g082320.3.1	No alias	no hits & (original description: none)	0.02	SeedPlants
Zm00001e030700_P001	No alias	no hits & (original description: none)	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-dependent DNA replication	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003126	Znf_UBR	49	106

External Links

No external refs found!