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  5. Len_g44098

Len_g44098 (SYP125, ATSYP125)


Aliases : SYP125, ATSYP125

Description : Qa-type SYP1-group component of SNARE membrane fusion complex & original description: none


Gene families : OG0000392 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000392_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g44098

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00050990 SYP121,... Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species
AT3G03800 ATSYP131, SYP131 syntaxin of plants 131 0.01 OrthoFinder output from all 47 species
Adi_g006738 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.03 OrthoFinder output from all 47 species
Als_g40011 SYP125, ATSYP125 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
GSVIVT01030578001 ATSYP124, SYP124 Vesicle trafficking.SNARE target membrane recognition... 0.01 OrthoFinder output from all 47 species
Gb_24889 ATSYP131, SYP131 SYP1-group Qa-type SNARE component 0.06 OrthoFinder output from all 47 species
Ppi_g35831 ATSYP131, SYP131 Qa-type SYP1-group component of SNARE membrane fusion... 0.01 OrthoFinder output from all 47 species
Tin_g46296 ATSYP124, SYP124 Qa-type SYP1-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 175 227
IPR006011 Syntaxin_N 3 174
No external refs found!