Smo170150 (PACid_15403664)


Aliases : PACid_15403664

Description : 35.1.1 not assigned.no ontology.ABC1 family protein member of ATH subfamily ATATH8 FUNCTIONS IN: transporter activity LOCATED IN: chloroplast EXPRESSED IN: 21 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: ABC-1 (InterPro:IPR004147), Aminoglycoside phosphotransferase (InterPro:IPR002575), Protein kinase-like domain (InterPro:IPR011009) BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT5G24970.2) Has 9890 Blast hits to 9844 proteins in 1785 species: Archae - 124 Bacteria - 4354 Metazoa - 432 Fungi - 482 Plants - 693 Viruses - 14 Other Eukaryotes - 3791 (source: NCBI BLink). & (chl4|520609 : 300.0


Gene families : OG_01_0000439 (Gene family) Phylogenetic Tree(s): OG0000439_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo170150
Cluster HCCA cluster: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
AT1G79600 No alias Protein kinase superfamily protein 0.02 Gene family
AT2G39190 ATATH8 Protein kinase superfamily protein 0.02 Gene family
AT3G24190 No alias Protein kinase superfamily protein 0.05 Gene family
Cpa|evm.model.tig00000144.28 No alias 35.1.1 not assigned.no ontology.ABC1 family protein... 0.03 Gene family
Cpa|evm.model.tig00000404.56 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Cpa|evm.model.tig00020660.19 No alias 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
Cre03.g158500 No alias 34.16 transport.ABC transporters and multidrug... 0.03 Gene family
Cre04.g215400 No alias 35.1.1 not assigned.no ontology.ABC1 family protein... 0.03 Gene family
Cre05.g246552 No alias 35.1.1 not assigned.no ontology.ABC1 family protein... 0.03 Gene family
Cre06.g269801 No alias 35.1.1 not assigned.no ontology.ABC1 family protein... 0.02 Gene family
GSVIVT01000514001 No alias 35.1.1 not assigned.no ontology.ABC1 family protein... 0.05 Gene family
GSVIVT01013666001 No alias 35.1.1 not assigned.no ontology.ABC1 family protein... 0.02 Gene family
GSVIVT01015910001 No alias 34.16 transport.ABC transporters and multidrug... 0.05 Gene family
LOC_Os02g57160 Os02g0816600 35.1.1 not assigned.no ontology.ABC1 family protein... 0.02 Gene family
LOC_Os05g25840 Os05g0323800 34.16 transport.ABC transporters and multidrug... 0.02 Gene family
MA_593828g0010 No alias 35.1.1 not assigned.no ontology.ABC1 family protein... 0.02 Gene family
Solyc04g072235.1.1 Solyc04g072235.1 35.1.1 not assigned.no ontology.ABC1 family protein... 0.02 Gene family
Solyc09g091580.3.1 Solyc09g091580.3 35.1.1 not assigned.no ontology.ABC1 family protein... 0.06 Gene family
Zm00001d002129 GRMZM2G305007 35.1.1 not assigned.no ontology.ABC1 family protein... 0.05 Gene family
Zm00001d051915 GRMZM2G157369 35.1.1 not assigned.no ontology.ABC1 family protein... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004147 UbiB_dom 62 179
No external refs found!