Smo170139 (PACid_15403616)


Aliases : PACid_15403616

Description : 31.2 cell.division cell division cycle protein 48-related / CDC48-related FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, ATP binding EXPRESSED IN: 17 plant structures EXPRESSED DURING: 7 growth stages CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Bromodomain (InterPro:IPR001487) BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT3G15120.1) Has 67654 Blast hits to 42823 proteins in 3246 species: Archae - 1526 Bacteria - 25275 Metazoa - 14857 Fungi - 7046 Plants - 4267 Viruses - 557 Other Eukaryotes - 14126 (source: NCBI BLink). & (chl4|511401 : 288.0


Gene families : OG_01_0006557 (Gene family) Phylogenetic Tree(s): OG0006557_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo170139
Cluster HCCA cluster: Cluster_172

Target Alias Description ECC score Gene Family Method Actions
AT1G05910 No alias cell division cycle protein 48-related / CDC48-related 0.02 Gene family
LOC_Os09g33980 Os09g0515100 31.2 cell.division cell division cycle protein... 0.04 Gene family
MA_10432357g0010 No alias 31.2 cell.division cell division cycle protein... 0.03 Gene family
Solyc04g076180.3.1 Solyc04g076180.3 31.2 cell.division cell division cycle protein... 0.04 Gene family
Zm00001d021145 GRMZM2G040079 31.2 cell.division cell division cycle protein... 0.02 Gene family

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 120 254
No external refs found!