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  5. Len_g43856

Len_g43856


Description : not classified & original description: none


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g43856

Target Alias Description ECC score Gene Family Method Actions
Als_g02366 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45789.t1 Aspi01Gene45789 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g09530 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g10487 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21453 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05274 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g02503 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06002 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo442102 No alias Bifunctional nuclease 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Tin_g24329 BBD1, ATBBD1 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 129 239
No external refs found!