AT4G23460


Description : Adaptin family protein


Gene families : OG_01_0004656 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004656_tree ,
OG_02_0005385 (LandPlants) Phylogenetic Tree(s): OG_02_0005385_tree ,
OG_03_0007627 (SeedPlants) Phylogenetic Tree(s): OG_03_0007627_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G23460
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00102p00095780 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.03 Archaeplastida
Cpa|evm.model.tig00020592.38 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 Archaeplastida
Cre11.g478156 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.05 Archaeplastida
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.13 Archaeplastida
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.05 Archaeplastida
LOC_Os03g23950.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.15 Archaeplastida
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.06 Archaeplastida
MA_10436050g0010 No alias Beta-adaptin-like protein C OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_83634g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Mp1g25810.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.09 Archaeplastida
Pp3c14_2460V3.1 No alias Adaptin family protein 0.07 Archaeplastida
Pp3c1_19340V3.1 No alias Adaptin family protein 0.06 Archaeplastida
Pp3c2_18140V3.1 No alias Adaptin family protein 0.05 Archaeplastida
Smo269184 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.07 Archaeplastida
Solyc08g081320.3.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.08 Archaeplastida
Zm00001e001693_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.14 Archaeplastida
Zm00001e038184_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.15 Archaeplastida
AMTR_s00102p00095780 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 LandPlants
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.14 LandPlants
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.05 LandPlants
LOC_Os03g23950.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.14 LandPlants
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.05 LandPlants
MA_10436050g0010 No alias Beta-adaptin-like protein C OS=Arabidopsis thaliana... 0.05 LandPlants
MA_83634g0010 No alias no hits & (original description: none) 0.05 LandPlants
Mp1g25810.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.09 LandPlants
Pp3c14_2460V3.1 No alias Adaptin family protein 0.07 LandPlants
Pp3c1_19340V3.1 No alias Adaptin family protein 0.05 LandPlants
Pp3c2_18140V3.1 No alias Adaptin family protein 0.04 LandPlants
Smo269184 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.08 LandPlants
Solyc08g081320.3.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.08 LandPlants
Zm00001e001693_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.15 LandPlants
Zm00001e038184_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.16 LandPlants
AMTR_s00102p00095780 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 SeedPlants
GSVIVT01019391001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.14 SeedPlants
Gb_11857 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.05 SeedPlants
LOC_Os03g23950.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.14 SeedPlants
MA_10434151g0010 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.04 SeedPlants
Solyc08g081320.3.1 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.08 SeedPlants
Zm00001e001693_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.15 SeedPlants
Zm00001e038184_P001 No alias large subunit beta of AP-1 trans-Golgi network cargo... 0.16 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0009506 plasmodesma IDA Interproscan
MF GO:0030276 clathrin binding ISS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002553 Clathrin/coatomer_adapt-like_N 15 533
IPR015151 B-adaptin_app_sub_C 782 890
IPR008152 Clathrin_a/b/g-adaptin_app_Ig 669 771
No external refs found!