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Aliases : DOT4
Description : not classified & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00137p00065490 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G18485 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT1G47580 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g004440 | EMB2758 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g008519 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Adi_g033814 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g049577 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g116250 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g22784 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g24034 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g27912 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g30051 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g07454 | OTP84 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g07484 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Als_g32865 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Als_g54957 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g27579 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g69406 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene36455.t1 | CRR21, Aspi01Gene36455 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0003.g007744 | No alias | not classified & original description: CDS=1-3075 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009167 | No alias | not classified & original description: CDS=1-2571 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0022.g015998 | OTP84 | not classified & original description: CDS=1-2163 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0030.g024353 | No alias | not classified & original description: CDS=25-2709 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0068.g036354 | CRR22 | not classified & original description: CDS=140-2386 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0081.g038640 | OTP86 | not classified & original description: CDS=63-2522 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0094.g043402 | No alias | not classified & original description: CDS=1-2055 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0191.g057023 | No alias | not classified & original description: CDS=1-2787 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0216.g058493 | No alias | not classified & original description: CDS=1-2574 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0349.g066478 | OTP84 | not classified & original description: CDS=1-2082 | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0506.g073971 | No alias | not classified & original description: CDS=1-2430 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s1707.g105997 | No alias | not classified & original description: CDS=1-2574 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g05314 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05970 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07719 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g19060 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g20881 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g44516 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g76849 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G018600.1 | Ceric.01G018600 | not classified & original description: pacid=50592052... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G062600.1 | Ceric.01G062600 | not classified & original description: pacid=50592906... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G018200.1 | OTP84, Ceric.04G018200 | not classified & original description: pacid=50630783... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.04G031200.1 | Ceric.04G031200 | not classified & original description: pacid=50630737... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.1Z079200.1 | CRR22, Ceric.1Z079200 | not classified & original description: pacid=50582193... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G040700.1 | Ceric.20G040700 | not classified & original description: pacid=50566494... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.30G066500.1 | Ceric.30G066500 | not classified & original description: pacid=50608384... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.32G042700.1 | Ceric.32G042700 | not classified & original description: pacid=50598057... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.32G058000.1 | Ceric.32G058000 | not classified & original description: pacid=50598467... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.33G060200.1 | Ceric.33G060200 | not classified & original description: pacid=50607485... | 0.03 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000851.30 | No alias | Pentatricopeptide repeat-containing protein At5g61990,... | 0.01 | OrthoFinder output from all 47 species | |
| Dcu_g06464 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g07074 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g07737 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08263 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g08876 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08966 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g16678 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g26799 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g43330 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g45852 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g47933 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g49092 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g03987 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04325 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g05894 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g10613 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g16392 | OTP84 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g22020 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g23187 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g38179 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g47657 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g49917 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g50255 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g16282 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26370 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01017365001 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01021756001 | No alias | Pentatricopeptide repeat-containing protein At4g21300... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_21443 | OTP86 | Pentatricopeptide repeat-containing protein At3g63370,... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os04g41120.1 | LOC_Os04g41120 | Pentatricopeptide repeat-containing protein At4g38010... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g12162 | No alias | not classified & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| MA_10138132g0010 | No alias | Pentatricopeptide repeat-containing protein At3g02330,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_11074g0010 | OTP84 | Pentatricopeptide repeat-containing protein At3g57430,... | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g12189 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g10444 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Nbi_g38619 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g06871 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g12551 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g18691 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g37890 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g01983 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g13627 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g15312 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pnu_g30093 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g30109 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g10239 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g56353 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0022.g008680 | No alias | not classified & original description: CDS=1-2187 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0035.g011483 | No alias | not classified & original description: CDS=1-2124 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0244.g026675 | No alias | not classified & original description: CDS=1-1575 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g16206 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Sam_g17245 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g33428 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g37180 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g37186 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g39953 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo180422 | CRR22 | Pentatricopeptide repeat-containing protein At2g13600... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g065840.3.1 | OSB1, Solyc09g065840 | ssDNA-binding protein (OSB) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g09530 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g29172 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e005071_P002 | OSB1, Zm00001e005071 | ssDNA-binding protein (OSB) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e029186_P001 | Zm00001e029186 | Pentatricopeptide repeat-containing protein At1g19720... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000160 | phosphorelay signal transduction system | IEP | HCCA |
| BP | GO:0001522 | pseudouridine synthesis | IEP | HCCA |
| MF | GO:0005525 | GTP binding | IEP | HCCA |
| BP | GO:0007165 | signal transduction | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| MF | GO:0009982 | pseudouridine synthase activity | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| MF | GO:0016853 | isomerase activity | IEP | HCCA |
| MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
| MF | GO:0019001 | guanyl nucleotide binding | IEP | HCCA |
| MF | GO:0032561 | guanyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0035556 | intracellular signal transduction | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 153 | 176 |
| IPR002885 | Pentatricopeptide_repeat | 485 | 513 |
| IPR002885 | Pentatricopeptide_repeat | 517 | 544 |
| IPR002885 | Pentatricopeptide_repeat | 587 | 611 |
| IPR002885 | Pentatricopeptide_repeat | 356 | 378 |
| IPR002885 | Pentatricopeptide_repeat | 53 | 74 |
| IPR002885 | Pentatricopeptide_repeat | 552 | 581 |
| IPR002885 | Pentatricopeptide_repeat | 382 | 428 |
| IPR002885 | Pentatricopeptide_repeat | 78 | 125 |
| IPR002885 | Pentatricopeptide_repeat | 281 | 328 |
| IPR002885 | Pentatricopeptide_repeat | 181 | 226 |
| No external refs found! |