Smo168290 (PACid_15420788)

Aliases : PACid_15420788

Description : 29.1.30 protein.aa activation.pseudouridylate synthase Pseudouridine synthase family protein FUNCTIONS IN: pseudouridine synthase activity, RNA binding INVOLVED IN: pseudouridine synthesis, RNA modification LOCATED IN: cellular_component unknown EXPRESSED IN: 21 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: Pseudouridine synthase, catalytic domain (InterPro:IPR020103), Pseudouridine synthase, RsuA and RluB/C/D/E/F (InterPro:IPR006145), Pseudouridine synthase, RluC/RluD, conserved site (InterPro:IPR006224) BEST Arabidopsis thaliana protein match is: Pseudouridine synthase family protein (TAIR:AT5G51140.1). & (loc_os03g17920.2 : 183.0

Gene families : OG_01_0007765 (Gene family) Phylogenetic Tree(s): OG0007765_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR network (cutoff 100): Smo168290
Cluster HCCA cluster: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Cre16.g689100 No alias 29.1.30 protein.aa activation.pseudouridylate synthase... 0.01 Gene family
GSVIVT01016310001 No alias 29.1.30 protein.aa activation.pseudouridylate synthase... 0.02 Gene family

Type GO Term Name Evidence Source
BP GO:0009451 RNA modification IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR006145 PsdUridine_synth_RsuA/RluD 175 276
No external refs found!