Smo167991 (PACid_15423127)


Aliases : PACid_15423127

Description : 29.3.4.3 protein.targeting.secretory pathway.vacuole VPS35 homolog B (VPS35B) CONTAINS InterPro DOMAIN/s: Vacuolar protein sorting-associated protein 35 (InterPro:IPR005378) BEST Arabidopsis thaliana protein match is: VPS35 homolog A (TAIR:AT2G17790.1) Has 618 Blast hits to 508 proteins in 209 species: Archae - 0 Bacteria - 1 Metazoa - 191 Fungi - 219 Plants - 72 Viruses - 0 Other Eukaryotes - 135 (source: NCBI BLink). & (chl4|511219 : 479.0


Gene families : OG_01_0002944 (Gene family) Phylogenetic Tree(s): OG0002944_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo167991
Cluster HCCA cluster: Cluster_96

Target Alias Description ECC score Gene Family Method Actions
AT2G17790 ZIP3, VPS35A VPS35 homolog A 0.02 Gene family
GSVIVT01009948001 No alias 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.03 Gene family
GSVIVT01018728001 No alias 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.02 Gene family
LOC_Os03g58700 Os03g0801600 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.04 Gene family
Solyc02g083560.3.1 Solyc02g083560.3 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.03 Gene family
Solyc03g033400.3.1 Solyc03g033400.3 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.02 Gene family
Solyc12g089340.2.1 Solyc12g089340.2 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.02 Gene family
Zm00001d013059 GRMZM5G844195 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.05 Gene family
Zm00001d034492 GRMZM5G825524 29.3.4.3 protein.targeting.secretory pathway.vacuole... 0.05 Gene family

Type GO Term Name Evidence Source
BP GO:0042147 retrograde transport, endosome to Golgi IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR005378 Vps35 16 746
No external refs found!