Len_g42601 (ATCAF1, CAF1)

Aliases : ATCAF1, CAF1

Description : component *(CAF) of CRS2-CAF plastidial RNA splicing factor complexes & original description: none

Gene families : OG0001061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001061_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g42601

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00056p00043140	ATCAF1, CAF1,...	RNA processing.organelle machineries.RNA...	0.02	OrthoFinder output from all 47 species
Aspi01Gene60099.t1	ATCAF1, CAF1,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Cba_g06914	CAF2, ATCAF2	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g10803	ATCAF1, CAF1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g56937	CAF2, ATCAF2	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Solyc01g091940.3.1	Solyc01g091940	mCSF mitochondrial RNA splicing factor	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001890	RNA-binding_CRM	653	736
IPR001890	RNA-binding_CRM	535	618

External Links

No external refs found!