Len_g42306


Description : ssDNA-binding protein *(OSB) & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g42306

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00032470 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00035580 No alias Pentatricopeptide repeat-containing protein At5g44230... 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00031420 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
Adi_g018586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101344 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g30904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g33525 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05010 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g26629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g23399 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g33192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37552 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00588.t1 Aspi01Gene00588 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene22875.t1 Aspi01Gene22875 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23472.t1 CRR22, Aspi01Gene23472 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34544.t1 Aspi01Gene34544 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene72928.t1 Aspi01Gene72928 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0083.g038857 No alias not classified & original description: CDS=1-2421 0.03 OrthoFinder output from all 47 species
Cba_g03910 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g05254 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g30006 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G011400.1 Ceric.03G011400 not classified & original description: pacid=50571389... 0.03 OrthoFinder output from all 47 species
Ceric.03G043400.1 Ceric.03G043400 not classified & original description: pacid=50571475... 0.03 OrthoFinder output from all 47 species
Ceric.29G081800.1 VAC1, ECB2,... not classified & original description: pacid=50624309... 0.03 OrthoFinder output from all 47 species
Dac_g05106 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g28478 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g36036 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g42723 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g31896 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g11470.1 LOC_Os01g11470 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g03727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g03753 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17302 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18040 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18929 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04178 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g04986 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12699 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g17061 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g03763 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04357 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g11358 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g27109 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31656 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33650 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46073 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g23765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03818 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g08859 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g11526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g33646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55202 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63100 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001739 No alias not classified & original description: CDS=1-1443 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007452 No alias not classified & original description: CDS=1-2322 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0110.g020618 REME1 not classified & original description: CDS=24-1478 0.03 OrthoFinder output from all 47 species
Sam_g03326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g06304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g30207 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g36251 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g43933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo118230 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.02 OrthoFinder output from all 47 species
Smo228785 No alias Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
Smo92008 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.02 OrthoFinder output from all 47 species
Solyc04g079410.3.1 Solyc04g079410 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Tin_g31490 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g44236 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e041048_P001 OTP86, Zm00001e041048 RNA editing factor (OTP86) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!