Smo166499 (PACid_15416456)


Aliases : PACid_15416456

Description : 35.1 not assigned.no ontology Transducin/WD40 repeat-like superfamily protein CONTAINS InterPro DOMAIN/s: WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat 2 (InterPro:IPR019782), WD40-repeat-containing domain (InterPro:IPR017986), WD40 repeat (InterPro:IPR001680), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat, subgroup (InterPro:IPR019781) BEST Arabidopsis thaliana protein match is: Transducin family protein / WD-40 repeat family protein (TAIR:AT3G26480.1) Has 4620 Blast hits to 3140 proteins in 363 species: Archae - 18 Bacteria - 1955 Metazoa - 712 Fungi - 1091 Plants - 306 Viruses - 0 Other Eukaryotes - 538 (source: NCBI BLink). & (loc_os12g41620.1 : 411.0


Gene families : OG_01_0004589 (Gene family) Phylogenetic Tree(s): OG0004589_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo166499
Cluster HCCA cluster: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AT2G18900 No alias Transducin/WD40 repeat-like superfamily protein 0.09 Gene family
Cpa|evm.model.tig00020554.131 No alias 33.99 development.unspecified Transducin family protein... 0.02 Gene family
Cre04.g215350 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.06 Gene family
GSVIVT01030738001 No alias 35.1 not assigned.no ontology Transducin/WD40... 0.05 Gene family
LOC_Os12g41620 Os12g0609800 35.1 not assigned.no ontology Transducin/WD40... 0.04 Gene family
Solyc07g066410.3.1 Solyc07g066410.3 35.1 not assigned.no ontology Transducin/WD40... 0.06 Gene family
Zm00001d031041 GRMZM2G049201 35.1 not assigned.no ontology Transducin/WD40... 0.03 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 43 84
No external refs found!