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  5. Len_g41947

Len_g41947 (ATRAB8D, ATRABE1B, RABE1b)


Aliases : ATRAB8D, ATRABE1B, RABE1b

Description : not classified & original description: none


Gene families : OG0001305 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001305_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g41947

Target Alias Description ECC score Gene Family Method Actions
AT4G20360 ATRAB8D, ATRABE1B, RABE1b RAB GTPase homolog E1B 0.03 OrthoFinder output from all 47 species
Aev_g27656 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Als_g08146 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.05 OrthoFinder output from all 47 species
Als_g09356 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Als_g23756 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Aob_g15070 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene36272.t1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Ceric.10G078000.1 ATRAB8D,... translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Dac_g02773 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Dde_g18792 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.06 OrthoFinder output from all 47 species
GSVIVT01007638001 ATRAB8D, ATRABE1B, RABE1b Protein biosynthesis.organelle translation... 0.03 OrthoFinder output from all 47 species
Gb_29040 ATRAB8D, ATRABE1B, RABE1b EF-Tu translation elongation factor 0.02 OrthoFinder output from all 47 species
LOC_Os02g38210.1 ATRAB8D,... EF-Tu translation elongation factor 0.03 OrthoFinder output from all 47 species
Len_g31034 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g06070 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Mp1g03870.1 ATRAB8D, ATRABE1B, RABE1b EF-Tu translation elongation factor 0.06 OrthoFinder output from all 47 species
Nbi_g13791 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Pir_g05476 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Pnu_g24392 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Pp3c1_38670V3.1 ATRAB8D,... RAB GTPase homolog E1B 0.01 OrthoFinder output from all 47 species
Ppi_g34741 ATRAB8D, ATRABE1B, RABE1b not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo233481 ATRAB8D, ATRABE1B, RABE1b Protein biosynthesis.organelle translation... 0.02 OrthoFinder output from all 47 species
Solyc03g112150.1.1 ATRAB8D,... EF-Tu translation elongation factor 0.02 OrthoFinder output from all 47 species
Solyc06g071790.3.1 ATRAB8D,... EF-Tu translation elongation factor 0.05 OrthoFinder output from all 47 species
Spa_g10864 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.02 OrthoFinder output from all 47 species
Spa_g18775 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.04 OrthoFinder output from all 47 species
Spa_g22996 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Spa_g50677 ATRAB8D, ATRABE1B, RABE1b translation elongation factor *(EF-Tu) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e022880_P001 ATRAB8D,... EF-Tu translation elongation factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004160 Transl_elong_EFTu/EF1A_C 3 102
No external refs found!