Smo16613 (PACid_15418644)


Aliases : PACid_15418644

Description : 17.1.1.1.10 hormone metabolism.abscisic acid.synthesis-degradation.synthesis.9-cis-epoxycarotenoid dioxygenase Encodes 9-cis-epoxycarotenoid dioxygenase, a key enzyme in the biosynthesis of abscisic acid. The expression of this gene increases during the first 6h of imbibition. nine-cis-epoxycarotenoid dioxygenase 9 (NCED9) CONTAINS InterPro DOMAIN/s: Carotenoid oxygenase (InterPro:IPR004294) BEST Arabidopsis thaliana protein match is: nine-cis-epoxycarotenoid dioxygenase 3 (TAIR:AT3G14440.1) Has 2892 Blast hits to 2853 proteins in 497 species: Archae - 16 Bacteria - 810 Metazoa - 240 Fungi - 201 Plants - 889 Viruses - 0 Other Eukaryotes - 736 (source: NCBI BLink). (original description: no original description)'


Gene families : OG_01_0008165 (Gene family) Phylogenetic Tree(s): OG0008165_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo16613
Cluster HCCA cluster: Cluster_65


Type GO Term Name Evidence Source
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 2 218
No external refs found!