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  5. Len_g41461

Len_g41461 (iqd2)


Aliases : iqd2

Description : not classified & original description: none


Gene families : OG0000740 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000740_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g41461

Target Alias Description ECC score Gene Family Method Actions
AT1G01110 IQD18 IQ-domain 18 0.03 OrthoFinder output from all 47 species
AT2G26410 Iqd4 IQ-domain 4 0.02 OrthoFinder output from all 47 species
Adi_g058759 iqd17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05140 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G012900.1 IQD6, Ceric.14G012900 not classified & original description: pacid=50633767... 0.04 OrthoFinder output from all 47 species
Dde_g24360 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02611 IQD3 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_36296 iqd17 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g61720.8 IQD3, LOC_Os01g61720 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os05g03190.1 iqd2, LOC_Os05g03190 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Lfl_g08415 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27547 iqd17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29285 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g29600 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo67789 iqd2 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc10g084280.2.1 IQD3, Solyc10g084280 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Zm00001e027583_P001 iqd2, Zm00001e027583 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
InterPro domains Description Start Stop
IPR025064 DUF4005 430 498
IPR000048 IQ_motif_EF-hand-BS 131 149
No external refs found!