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  5. Len_g41148

Len_g41148 (SFD4, FADC, FAD6)


Aliases : SFD4, FADC, FAD6

Description : delta-12/delta-15 fatty acid desaturase & original description: none


Gene families : OG0002742 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002742_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g41148
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT4G30950 SFD4, FADC, FAD6 fatty acid desaturase 6 0.04 OrthoFinder output from all 47 species
Adi_g024275 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g087305 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.05 OrthoFinder output from all 47 species
Aev_g06834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12814 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.01 OrthoFinder output from all 47 species
Aev_g42346 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Ala_g06158 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Als_g18734 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Aob_g07184 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Aop_g01297 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.12 OrthoFinder output from all 47 species
Aspi01Gene53241.t1 SFD4, FADC,... delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Cba_g07549 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ceric.07G044600.1 SFD4, FADC,... delta-12/delta-15 fatty acid desaturase & original... 0.04 OrthoFinder output from all 47 species
Ceric.35G020100.1 SFD4, FADC,... delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01003874001 SFD4, FADC, FAD6 Omega-6 fatty acid desaturase, chloroplastic OS=Brassica napus 0.02 OrthoFinder output from all 47 species
Gb_24358 SFD4, FADC, FAD6 omega-3/omega-6 fatty acid desaturase 0.06 OrthoFinder output from all 47 species
LOC_Os08g34220.1 SFD4, FADC,... omega-3/omega-6 fatty acid desaturase 0.05 OrthoFinder output from all 47 species
Lfl_g07005 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.09 OrthoFinder output from all 47 species
Msp_g07910 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.06 OrthoFinder output from all 47 species
Nbi_g40241 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.06 OrthoFinder output from all 47 species
Pnu_g11735 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.06 OrthoFinder output from all 47 species
Spa_g19121 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.05 OrthoFinder output from all 47 species
Tin_g03268 SFD4, FADC, FAD6 delta-12/delta-15 fatty acid desaturase & original... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0030145 manganese ion binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 239 486
No external refs found!