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  5. Len_g40889

Len_g40889 (ATLP-1)


Aliases : ATLP-1

Description : not classified & original description: none


Gene families : OG0001475 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001475_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g40889

Target Alias Description ECC score Gene Family Method Actions
Ala_g08612 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20434.t1 PR-5, PR5,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40400.t1 Aspi01Gene40400 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40456.t1 Aspi01Gene40456 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.28G023300.1 Ceric.28G023300 not classified & original description: pacid=50569980... 0.03 OrthoFinder output from all 47 species
Ceric.28G023600.1 Ceric.28G023600 not classified & original description: pacid=50570739... 0.03 OrthoFinder output from all 47 species
Ceric.28G023900.1 Ceric.28G023900 not classified & original description: pacid=50569727... 0.03 OrthoFinder output from all 47 species
Dde_g25511 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g03446 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001938 Thaumatin 35 157
No external refs found!