AT4G20860


Description : FAD-binding Berberine family protein


Gene families : OG_01_0000172 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000172_tree ,
OG_02_0000076 (LandPlants) Phylogenetic Tree(s): OG_02_0000076_tree ,
OG_03_0000069 (SeedPlants) Phylogenetic Tree(s): OG_03_0000069_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G20860
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
AMTR_s00038p00163720 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
AT1G26380 No alias FAD-binding Berberine family protein 0.05 Archaeplastida
AT1G30700 No alias FAD-binding Berberine family protein 0.06 Archaeplastida
AT1G30720 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT1G30760 No alias FAD-binding Berberine family protein 0.03 Archaeplastida
AT5G44360 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
AT5G44380 No alias FAD-binding Berberine family protein 0.08 Archaeplastida
AT5G44390 No alias FAD-binding Berberine family protein 0.04 Archaeplastida
Cre09.g397253 No alias No description available 0.01 Archaeplastida
Cre11.g476600 No alias Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01003283001 No alias Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01015790001 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana 0.02 Archaeplastida
GSVIVT01015792001 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01020744001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
GSVIVT01020745001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 Archaeplastida
GSVIVT01020746001 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01021720001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.06 Archaeplastida
Gb_03609 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Gb_21185 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
Gb_24404 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Gb_24405 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
Gb_24415 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
LOC_Os06g35560.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.06 Archaeplastida
LOC_Os06g35630.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os06g35700.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 Archaeplastida
LOC_Os08g06170.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
LOC_Os08g06190.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
LOC_Os11g30310.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
MA_260168g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
MA_8516716g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
MA_9511312g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Mp7g02610.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Solyc02g022850.1.1 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g069690.1.1 No alias Berberine bridge enzyme-like 15 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g070090.1.1 No alias Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Solyc02g070110.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 Archaeplastida
Solyc02g070130.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g070170.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Solyc02g079440.3.1 No alias Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.06 Archaeplastida
Solyc02g079450.1.1 No alias Berberine bridge enzyme-like 23 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Solyc02g079480.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 Archaeplastida
Zm00001e030681_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Zm00001e037256_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
Zm00001e037259_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 Archaeplastida
AMTR_s00018p00124850 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
AMTR_s00032p00227420 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
AMTR_s00038p00163720 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
AT1G26380 No alias FAD-binding Berberine family protein 0.04 LandPlants
AT1G30700 No alias FAD-binding Berberine family protein 0.06 LandPlants
AT1G30720 No alias FAD-binding Berberine family protein 0.03 LandPlants
AT5G44380 No alias FAD-binding Berberine family protein 0.06 LandPlants
GSVIVT01003283001 No alias Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01015792001 No alias Berberine bridge enzyme-like 21 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01020744001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
GSVIVT01020745001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.05 LandPlants
GSVIVT01020746001 No alias Berberine bridge enzyme-like 13 OS=Arabidopsis thaliana 0.03 LandPlants
GSVIVT01021723001 No alias Berberine bridge enzyme-like 11 OS=Arabidopsis thaliana 0.03 LandPlants
Gb_21185 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
Gb_24404 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
Gb_24405 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
Gb_24415 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
LOC_Os06g35560.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
LOC_Os06g35630.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
LOC_Os06g35700.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
MA_10430302g0010 No alias Reticuline oxidase OS=Papaver somniferum... 0.02 LandPlants
MA_260168g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
MA_8334627g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
Solyc02g070090.1.1 No alias Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana... 0.02 LandPlants
Solyc02g070110.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.04 LandPlants
Solyc02g070130.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
Solyc02g079440.3.1 No alias Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.04 LandPlants
Zm00001e037256_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 LandPlants
Zm00001e037259_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 LandPlants
Zm00001e040211_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.01 LandPlants
AMTR_s00038p00162870 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
AMTR_s00038p00163940 evm_27.TU.AmTr_v1... Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
AT1G30700 No alias FAD-binding Berberine family protein 0.03 SeedPlants
AT5G44380 No alias FAD-binding Berberine family protein 0.03 SeedPlants
GSVIVT01020744001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
GSVIVT01020745001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
Gb_21185 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.01 SeedPlants
Gb_24404 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.01 SeedPlants
Gb_24405 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
Gb_24415 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
LOC_Os06g35700.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
LOC_Os08g06190.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
MA_10430302g0010 No alias Reticuline oxidase OS=Papaver somniferum... 0.02 SeedPlants
MA_132990g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.01 SeedPlants
MA_260168g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.01 SeedPlants
MA_8516716g0010 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.01 SeedPlants
Solyc02g070090.1.1 No alias Berberine bridge enzyme-like 8 OS=Arabidopsis thaliana... 0.02 SeedPlants
Solyc02g070110.1.1 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.03 SeedPlants
Solyc02g079440.3.1 No alias Berberine bridge enzyme-like 22 OS=Arabidopsis thaliana... 0.04 SeedPlants
Zm00001e037256_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.02 SeedPlants
Zm00001e040211_P001 No alias Enzyme classification.EC_1 oxidoreductases.EC_1.1... 0.01 SeedPlants

Type GO Term Name Evidence Source
BP GO:0002679 respiratory burst involved in defense response RCA Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006865 amino acid transport RCA Interproscan
MF GO:0009055 electron transfer activity ISS Interproscan
BP GO:0009407 toxin catabolic process RCA Interproscan
BP GO:0010167 response to nitrate RCA Interproscan
BP GO:0010200 response to chitin RCA Interproscan
BP GO:0010583 response to cyclopentenone RCA Interproscan
BP GO:0015706 nitrate transport RCA Interproscan
BP GO:0015824 proline transport RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR012951 BBE 470 527
IPR006094 Oxid_FAD_bind_N 81 217
No external refs found!