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  5. Len_g40603

Len_g40603


Description : not classified & original description: none


Gene families : OG0003000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003000_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g40603
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AT3G22490 No alias Seed maturation protein 0.02 OrthoFinder output from all 47 species
AT3G22500 ATECP31 Seed maturation protein 0.02 OrthoFinder output from all 47 species
Aspi01Gene39752.t1 Aspi01Gene39752 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G017000.1 Ceric.07G017000 not classified & original description: pacid=50628070... 0.03 OrthoFinder output from all 47 species
Ceric.11G015400.1 Ceric.11G015400 not classified & original description: pacid=50596852... 0.03 OrthoFinder output from all 47 species
Ceric.12G023800.1 RAB28, ATRAB28,... not classified & original description: pacid=50600510... 0.04 OrthoFinder output from all 47 species
Ceric.32G026700.1 Ceric.32G026700 not classified & original description: pacid=50598394... 0.03 OrthoFinder output from all 47 species
GSVIVT01017985001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.03 OrthoFinder output from all 47 species
GSVIVT01021881001 No alias Late embryogenesis abundant protein D-34 OS=Gossypium hirsutum 0.03 OrthoFinder output from all 47 species
LOC_Os03g06360.1 LOC_Os03g06360 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.04 OrthoFinder output from all 47 species
LOC_Os03g53610.1 LOC_Os03g53610 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.03 OrthoFinder output from all 47 species
LOC_Os03g53620.1 ATECP31, LOC_Os03g53620 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os06g23350.1 LOC_Os06g23350 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.03 OrthoFinder output from all 47 species
Mp7g06630.1 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g25076 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g25972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo84789 No alias Late embryogenesis abundant protein 31 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc09g065360.4.1 Solyc09g065360 Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc09g082100.3.1 Solyc09g082100 Late embryogenesis abundant protein 31 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc09g082110.4.1 Solyc09g082110 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.04 OrthoFinder output from all 47 species
Zm00001e000449_P001 Zm00001e000449 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.02 OrthoFinder output from all 47 species
Zm00001e005665_P002 Zm00001e005665 Late embryogenesis abundant protein D-34 OS=Gossypium... 0.02 OrthoFinder output from all 47 species
Zm00001e005666_P001 Zm00001e005666 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006520 amino acid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007011 LEA_SMP_dom 12 66
IPR007011 LEA_SMP_dom 191 249
IPR007011 LEA_SMP_dom 126 183
No external refs found!