1. Home
  2. Species
  3. Lindsaea ensifolia
  4. Sequence
  5. Len_g40106

Len_g40106


Description : apocytochrome b component of cytochrome c reductase complex & original description: none


Gene families : OG0002807 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002807_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g40106
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT2G07727 No alias Di-haem cytochrome, transmembrane;Cytochrome b/b6, C-terminal 0.04 OrthoFinder output from all 47 species
ATCG00720 PETB photosynthetic electron transfer B 0.05 OrthoFinder output from all 47 species
Aev_g24354 No alias apocytochrome b component of cytochrome c reductase... 0.06 OrthoFinder output from all 47 species
Aev_g27762 PETB apocytochrome b component *(PetB) of cytochrome b6/f... 0.04 OrthoFinder output from all 47 species
Ala_g35856 No alias apocytochrome b component of cytochrome c reductase... 0.05 OrthoFinder output from all 47 species
Als_g39169 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Aob_g16275 No alias apocytochrome b component of cytochrome c reductase... 0.04 OrthoFinder output from all 47 species
Aop_g43076 No alias apocytochrome b component of cytochrome c reductase... 0.07 OrthoFinder output from all 47 species
Cba_g67442 No alias apocytochrome b component of cytochrome c reductase... 0.04 OrthoFinder output from all 47 species
Ceric.1Z163200.1 PETB, Ceric.1Z163200 not classified & original description: pacid=50596955... 0.03 OrthoFinder output from all 47 species
Ceric.1Z190500.1 Ceric.1Z190500 not classified & original description: pacid=50582113... 0.04 OrthoFinder output from all 47 species
Ceric.1Z200500.1 Ceric.1Z200500 not classified & original description: pacid=50618881... 0.03 OrthoFinder output from all 47 species
Ceric.1Z276900.1 Ceric.1Z276900 not classified & original description: pacid=50569323... 0.03 OrthoFinder output from all 47 species
Ceric.1Z297500.1 Ceric.1Z297500 not classified & original description: pacid=50597032... 0.03 OrthoFinder output from all 47 species
Ceric.1Z311700.1 Ceric.1Z311700 not classified & original description: pacid=50567778... 0.03 OrthoFinder output from all 47 species
Ceric.36G044700.1 PETB, Ceric.36G044700 not classified & original description: pacid=50568540... 0.04 OrthoFinder output from all 47 species
Dcu_g39082 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Gb_16762 No alias cytochrome b component of cytochrome c reductase complex 0.05 OrthoFinder output from all 47 species
Gb_17283 No alias Cytochrome b6 OS=Welwitschia mirabilis... 0.03 OrthoFinder output from all 47 species
Gb_20951 No alias Cytochrome b OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Gb_31169 No alias cytochrome b component of cytochrome c reductase complex 0.03 OrthoFinder output from all 47 species
LOC_Os01g57942.1 PETB, LOC_Os01g57942 apocytochrome b component PetB of cytochrome b6/f complex 0.03 OrthoFinder output from all 47 species
LOC_Os04g16846.1 PETB, LOC_Os04g16846 apocytochrome b component PetB of cytochrome b6/f complex 0.03 OrthoFinder output from all 47 species
LOC_Os10g21324.1 PETB, LOC_Os10g21324 apocytochrome b component PetB of cytochrome b6/f complex 0.03 OrthoFinder output from all 47 species
Nbi_g20498 No alias apocytochrome b component of cytochrome c reductase... 0.09 OrthoFinder output from all 47 species
Ore_g00397 PETB apocytochrome b component *(PetB) of cytochrome b6/f... 0.03 OrthoFinder output from all 47 species
Pir_g06448 No alias apocytochrome b component of cytochrome c reductase... 0.04 OrthoFinder output from all 47 species
Sam_g14362 No alias apocytochrome b component of cytochrome c reductase... 0.06 OrthoFinder output from all 47 species
Solyc00g047200.1.1 Solyc00g047200 Cytochrome b OS=Solanum tuberosum (sp|p29757|cyb_soltu : 130.0) 0.02 OrthoFinder output from all 47 species
Solyc00g500240.1.1 Solyc00g500240 cytochrome b component of cytochrome c reductase complex 0.03 OrthoFinder output from all 47 species
Solyc00g500260.1.1 Solyc00g500260 cytochrome b component of cytochrome c reductase... 0.02 OrthoFinder output from all 47 species
Solyc00g500364.1.1 Solyc00g500364 cytochrome b component of cytochrome c reductase complex 0.03 OrthoFinder output from all 47 species
Spa_g23500 No alias apocytochrome b component of cytochrome c reductase... 0.08 OrthoFinder output from all 47 species
Tin_g20386 No alias apocytochrome b component of cytochrome c reductase... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0009055 electron transfer activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
InterPro domains Description Start Stop
IPR005797 Cyt_b/b6_N 21 208
IPR005798 Cyt_b/b6_C 263 363
No external refs found!