AT4G19530

Description : disease resistance protein (TIR-NBS-LRR class) family

Gene families : OG_01_0010150 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010150_tree ,
OG_02_0010204 (LandPlants) Phylogenetic Tree(s): OG_02_0010204_tree ,
OG_03_0008076 (SeedPlants) Phylogenetic Tree(s): OG_03_0008076_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G19530
Cluster	HCCA: Cluster_121

Target	Alias	Description	ECC score	Gene Family Method
AT5G44870	LAZ5	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G45200	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.05	Archaeplastida
AT5G45250	RPS4	Disease resistance protein (TIR-NBS-LRR class) family	0.03	Archaeplastida
AT5G45250	RPS4	Disease resistance protein (TIR-NBS-LRR class) family	0.03	LandPlants
AT5G17880	CSA1	disease resistance protein (TIR-NBS-LRR class)	0.03	SeedPlants
AT5G45060	No alias	Disease resistance protein (TIR-NBS-LRR class) family	0.02	SeedPlants
AT5G45250	RPS4	Disease resistance protein (TIR-NBS-LRR class) family	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006464	cellular protein modification process	None	Extended
BP	GO:0006468	protein phosphorylation	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009451	RNA modification	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009637	response to blue light	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010155	regulation of proton transport	RCA	Interproscan
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016071	mRNA metabolic process	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
BP	GO:0016556	mRNA modification	RCA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034762	regulation of transmembrane transport	None	Extended
BP	GO:0034765	regulation of ion transmembrane transport	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043269	regulation of ion transport	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046777	protein autophosphorylation	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051049	regulation of transport	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1904062	regulation of cation transmembrane transport	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000157	TIR_dom	15	184
IPR011713	Leu-rich_rpt_3	643	662
IPR002182	NB-ARC	222	441

External Links

No external refs found!

AT4G19530

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation