AT4G19170 (CCD4, NCED4)


Aliases : CCD4, NCED4

Description : nine-cis-epoxycarotenoid dioxygenase 4


Gene families : OG_01_0000267 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000267_tree ,
OG_02_0000908 (LandPlants) Phylogenetic Tree(s): OG_02_0000908_tree ,
OG_03_0003873 (SeedPlants) Phylogenetic Tree(s): OG_03_0003873_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G19170
Cluster HCCA: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001128.6 No alias No description available 0.01 Archaeplastida
MA_906445g0010 No alias No annotation 0.02 Archaeplastida
Pp3c22_6380V3.1 No alias carotenoid cleavage dioxygenase 1 0.04 Archaeplastida
Smo272067 No alias Secondary metabolism.terpenoids.terpenoid... 0.02 Archaeplastida
Smo80651 No alias Secondary metabolism.terpenoids.terpenoid... 0.04 Archaeplastida
Solyc08g075490.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.07 Archaeplastida
Zm00001e038960_P002 No alias carotenoid cleavage dioxygenase (CCD1) 0.05 Archaeplastida
Solyc08g075490.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.07 LandPlants
Gb_41235 No alias carotenoid cleavage dioxygenase (CCD4) 0.02 SeedPlants
Solyc08g075490.4.1 No alias carotenoid cleavage dioxygenase (CCD4) 0.07 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IPI Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
BP GO:0009718 anthocyanin-containing compound biosynthetic process RCA Interproscan
CC GO:0010287 plastoglobule IDA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004294 Carotenoid_Oase 115 587
No external refs found!