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  5. AT4G18980

AT4G18980 (AtS40-3)


Aliases : AtS40-3

Description : AtS40-3


Gene families : OG_01_0000280 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000280_tree ,
OG_02_0000173 (LandPlants) Phylogenetic Tree(s): OG_02_0000173_tree ,
OG_03_0000123 (SeedPlants) Phylogenetic Tree(s): OG_03_0000123_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G18980
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT5G03230 No alias Protein of unknown function, DUF584 0.02 Archaeplastida
GSVIVT01004631001 No alias No description available 0.03 Archaeplastida
GSVIVT01037661001 No alias No description available 0.02 Archaeplastida
Gb_36660 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g52730.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g52740.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os04g33760.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g43990.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g33270.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g27350.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10434437g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_118009g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_158445g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_2588g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_5080831g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_54260g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_63850g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp3g08200.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc10g006275.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc11g069450.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019921_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e027469_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e035102_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041345_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
AT5G03230 No alias Protein of unknown function, DUF584 0.02 LandPlants
GSVIVT01004631001 No alias No description available 0.03 LandPlants
GSVIVT01025190001 No alias No description available 0.02 LandPlants
GSVIVT01037661001 No alias No description available 0.02 LandPlants
LOC_Os04g33760.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os10g27350.1 No alias no hits & (original description: none) 0.02 LandPlants
MA_10434437g0010 No alias no hits & (original description: none) 0.04 LandPlants
MA_118009g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_2588g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_63850g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_88194g0010 No alias no hits & (original description: none) 0.01 LandPlants
Mp3g08200.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc07g064650.3.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc09g007790.1.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc10g006275.1.1 No alias no hits & (original description: none) 0.03 LandPlants
Solyc11g069450.1.1 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e027469_P001 No alias no hits & (original description: none) 0.05 LandPlants
AT5G03230 No alias Protein of unknown function, DUF584 0.02 SeedPlants
GSVIVT01004631001 No alias No description available 0.02 SeedPlants
Gb_40492 No alias no hits & (original description: none) 0.01 SeedPlants
LOC_Os04g33760.1 No alias no hits & (original description: none) 0.02 SeedPlants
MA_10434437g0010 No alias no hits & (original description: none) 0.03 SeedPlants
MA_118009g0010 No alias no hits & (original description: none) 0.01 SeedPlants
MA_2588g0010 No alias no hits & (original description: none) 0.02 SeedPlants
MA_63850g0010 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc09g007790.1.1 No alias no hits & (original description: none) 0.02 SeedPlants
Solyc10g006275.1.1 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e027469_P001 No alias no hits & (original description: none) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0010150 leaf senescence IMP Interproscan
BP GO:0010468 regulation of gene expression IEP Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007608 Senescence_reg_S40 23 105
No external refs found!