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  5. Len_g38595

Len_g38595 (AtTLP3, TLP3)


Aliases : AtTLP3, TLP3

Description : TUB-type transcription factor & original description: none


Gene families : OG0000251 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000251_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g38595

Target Alias Description ECC score Gene Family Method Actions
Ceric.31G036400.1 AtTLP3, TLP3,... TUB-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ehy_g09015 AtTLP3, TLP3 TUB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430830g0020 TLP10, AtTLP10 transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Smo230435 AtTLP3, TLP3 RNA biosynthesis.transcriptional activation.TUB... 0.04 OrthoFinder output from all 47 species
Zm00001e024653_P002 AtTLP1, TLP1,... transcription factor (TUB) 0.05 OrthoFinder output from all 47 species
Zm00001e032131_P001 AtTLP7, TLP7,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species
Zm00001e039448_P004 TLP10, AtTLP10,... transcription factor (TUB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015693 magnesium ion transport IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 119 410
IPR001810 F-box_dom 58 104
No external refs found!