Len_g38524


Description : not classified & original description: none


Gene families : OG0000010 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g38524

Target Alias Description ECC score Gene Family Method Actions
Adi_g015765 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g103016 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g105173 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g35904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35429 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g69345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene31947.t1 Aspi01Gene31947 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g16400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g39054 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g68114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75972 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.08G046300.1 Ceric.08G046300 not classified & original description: pacid=50638415... 0.03 OrthoFinder output from all 47 species
Ceric.10G002000.1 Ceric.10G002000 not classified & original description: pacid=50612873... 0.05 OrthoFinder output from all 47 species
Dcu_g19476 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g05093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g22432 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g47108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g51045 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Len_g22234 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g23807 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g27276 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g32508 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g37487 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g51189 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g51445 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g55936 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g34317 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46057 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g48113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05996 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g12591 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44589 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g13665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g64463 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g65986 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g32466 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g17284 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g22445 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g31051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53685 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53807 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g54068 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g55684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g20820 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29161 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g07106 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g30953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g35421 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g41144 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45329 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000154 rRNA modification IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
MF GO:0008649 rRNA methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016436 rRNA (uridine) methyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0031167 rRNA methylation IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0070042 rRNA (uridine-N3-)-methyltransferase activity IEP HCCA
BP GO:0070475 rRNA base methylation IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140102 catalytic activity, acting on a rRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!