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  5. Len_g38404

Len_g38404


Description : not classified & original description: none


Gene families : OG0000419 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000419_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g38404
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
Aop_g07881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre02.g091750 No alias No description available 0.01 OrthoFinder output from all 47 species
Cre12.g492750 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g551200 No alias No description available 0.02 OrthoFinder output from all 47 species
Dde_g31317 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os05g37450.1 LOC_Os05g37450 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g16100.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g05208 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g07245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02918 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g15680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29904 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g37437 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:2001070 starch binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002044 CBM_fam20 61 144
No external refs found!