Smo157786 (PACid_15414592)


Aliases : PACid_15414592

Description : 29.5.11.5 protein.degradation.ubiquitin.ubiquitin protease Ubiquitin-specific protease 6 (UBP6). Deubiquinating enzyme. Interacts with calmodulin. ubiquitin-specific protease 6 (UBP6) CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394) BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 7 (TAIR:AT3G21280.1) Has 4803 Blast hits to 4486 proteins in 237 species: Archae - 0 Bacteria - 0 Metazoa - 2534 Fungi - 849 Plants - 654 Viruses - 2 Other Eukaryotes - 764 (source: NCBI BLink). & (chl4|517635 : 394.0


Gene families : OG_01_0003992 (Gene family) Phylogenetic Tree(s): OG0003992_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo157786
Cluster HCCA cluster: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
AT1G51710 UBP6, ATUBP6 ubiquitin-specific protease 6 0.02 Gene family
Cpa|evm.model.tig00020554.157 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.01 Gene family
Cre17.g726050 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.03 Gene family
GSVIVT01016888001 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.02 Gene family
LOC_Os01g36930 Os01g0550100 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.03 Gene family
MA_127692g0010 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.01 Gene family
Solyc12g044740.2.1 Solyc12g044740.2 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.03 Gene family
Zm00001d044514 GRMZM2G017086,... 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.06 Gene family

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 6 75
No external refs found!