AT4G18480 (CH42, CHLI1, CH-42,...)

Aliases : CH42, CHLI1, CH-42, CHL11, CHLI-1

Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein

Gene families : OG_01_0005701 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005701_tree ,
OG_02_0007264 (LandPlants) Phylogenetic Tree(s): OG_02_0007264_tree ,
OG_03_0008341 (SeedPlants) Phylogenetic Tree(s): OG_03_0008341_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G18480
Cluster	HCCA: Cluster_116

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00092p00167540	evm_27.TU.AmTr_v1...	Enzyme classification.EC_6 ligases.EC_6.6 ligase forming...	0.05	Archaeplastida
Cre06.g306300	No alias	Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll...	0.09	Archaeplastida
Cre12.g510800	No alias	Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll...	0.09	Archaeplastida
GSVIVT01021169001	No alias	Enzyme classification.EC_6 ligases.EC_6.6 ligase forming...	0.24	Archaeplastida
Gb_27010	No alias	component CHL-I of magnesium-chelatase complex	0.07	Archaeplastida
LOC_Os03g36540.1	No alias	component CHL-I of magnesium-chelatase complex	0.24	Archaeplastida
MA_48250g0010	No alias	component CHL-I of magnesium-chelatase complex	0.15	Archaeplastida
Mp2g21150.1	No alias	component CHL-I of magnesium-chelatase complex	0.25	Archaeplastida
Pp3c10_2940V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.12	Archaeplastida
Pp3c2_15490V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.05	Archaeplastida
Smo230423	No alias	Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll...	0.09	Archaeplastida
Solyc10g008740.3.1	No alias	component CHL-I of magnesium-chelatase complex	0.21	Archaeplastida
Zm00001e039463_P003	No alias	component CHL-I of magnesium-chelatase complex	0.15	Archaeplastida
AMTR_s00092p00167540	evm_27.TU.AmTr_v1...	Enzyme classification.EC_6 ligases.EC_6.6 ligase forming...	0.03	LandPlants
GSVIVT01021169001	No alias	Enzyme classification.EC_6 ligases.EC_6.6 ligase forming...	0.23	LandPlants
Gb_27010	No alias	component CHL-I of magnesium-chelatase complex	0.07	LandPlants
LOC_Os03g36540.1	No alias	component CHL-I of magnesium-chelatase complex	0.22	LandPlants
MA_48250g0010	No alias	component CHL-I of magnesium-chelatase complex	0.13	LandPlants
Mp2g21150.1	No alias	component CHL-I of magnesium-chelatase complex	0.24	LandPlants
Pp3c10_2940V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.1	LandPlants
Pp3c2_15490V3.1	No alias	P-loop containing nucleoside triphosphate hydrolases...	0.04	LandPlants
Smo230423	No alias	Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll...	0.08	LandPlants
Solyc10g008740.3.1	No alias	component CHL-I of magnesium-chelatase complex	0.21	LandPlants
Zm00001e039463_P003	No alias	component CHL-I of magnesium-chelatase complex	0.14	LandPlants
AMTR_s00092p00167540	evm_27.TU.AmTr_v1...	Enzyme classification.EC_6 ligases.EC_6.6 ligase forming...	0.03	SeedPlants
GSVIVT01021169001	No alias	Enzyme classification.EC_6 ligases.EC_6.6 ligase forming...	0.23	SeedPlants
Gb_27010	No alias	component CHL-I of magnesium-chelatase complex	0.07	SeedPlants
LOC_Os03g36540.1	No alias	component CHL-I of magnesium-chelatase complex	0.22	SeedPlants
MA_48250g0010	No alias	component CHL-I of magnesium-chelatase complex	0.12	SeedPlants
Solyc10g008740.3.1	No alias	component CHL-I of magnesium-chelatase complex	0.2	SeedPlants
Zm00001e039463_P003	No alias	component CHL-I of magnesium-chelatase complex	0.14	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	IDA	Interproscan
CC	GO:0005622	intracellular anatomical structure	None	Extended
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006364	rRNA processing	RCA	Interproscan
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	None	Extended
BP	GO:0006636	unsaturated fatty acid biosynthetic process	RCA	Interproscan
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006650	glycerophospholipid metabolic process	None	Extended
BP	GO:0006655	phosphatidylglycerol biosynthetic process	RCA	Interproscan
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006778	porphyrin-containing compound metabolic process	None	Extended
BP	GO:0006779	porphyrin-containing compound biosynthetic process	None	Extended
BP	GO:0006790	sulfur compound metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009532	plastid stroma	None	Extended
CC	GO:0009536	plastid	None	Extended
CC	GO:0009570	chloroplast stroma	IDA	Interproscan
BP	GO:0009653	anatomical structure morphogenesis	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	None	Extended
BP	GO:0009735	response to cytokinin	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0010007	magnesium chelatase complex	TAS	Interproscan
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010103	stomatal complex morphogenesis	RCA	Interproscan
BP	GO:0015994	chlorophyll metabolic process	None	Extended
BP	GO:0015995	chlorophyll biosynthetic process	RCA	Interproscan
BP	GO:0015995	chlorophyll biosynthetic process	TAS	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0016072	rRNA metabolic process	None	Extended
BP	GO:0016108	tetraterpenoid metabolic process	None	Extended
BP	GO:0016109	tetraterpenoid biosynthetic process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
BP	GO:0016116	carotenoid metabolic process	None	Extended
BP	GO:0016117	carotenoid biosynthetic process	RCA	Interproscan
BP	GO:0016143	S-glycoside metabolic process	None	Extended
BP	GO:0016144	S-glycoside biosynthetic process	None	Extended
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016851	magnesium chelatase activity	ISS	Interproscan
MF	GO:0016851	magnesium chelatase activity	NAS	Interproscan
MF	GO:0016874	ligase activity	None	Extended
MF	GO:0016887	ATPase activity	IDA	Interproscan
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	RCA	Interproscan
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	None	Extended
BP	GO:0019748	secondary metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0019757	glycosinolate metabolic process	None	Extended
BP	GO:0019758	glycosinolate biosynthetic process	None	Extended
BP	GO:0019760	glucosinolate metabolic process	None	Extended
BP	GO:0019761	glucosinolate biosynthetic process	RCA	Interproscan
CC	GO:0030312	external encapsulating structure	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0033013	tetrapyrrole metabolic process	None	Extended
BP	GO:0033014	tetrapyrrole biosynthetic process	None	Extended
BP	GO:0033559	unsaturated fatty acid metabolic process	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0042440	pigment metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044272	sulfur compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0044550	secondary metabolite biosynthetic process	None	Extended
BP	GO:0045017	glycerolipid biosynthetic process	None	Extended
BP	GO:0046148	pigment biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0046471	phosphatidylglycerol metabolic process	None	Extended
BP	GO:0046474	glycerophospholipid biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046486	glycerolipid metabolic process	None	Extended
BP	GO:0046490	isopentenyl diphosphate metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
MF	GO:0051002	ligase activity, forming nitrogen-metal bonds	None	Extended
MF	GO:0051003	ligase activity, forming nitrogen-metal bonds, forming coordination complexes	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
BP	GO:0090626	plant epidermis morphogenesis	None	Extended
BP	GO:0090698	post-embryonic plant morphogenesis	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
BP	GO:1901657	glycosyl compound metabolic process	None	Extended
BP	GO:1901659	glycosyl compound biosynthetic process	None	Extended
CC	GO:1902494	catalytic complex	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000523	Mg_chelatse_chII_dom	200	270

External Links

No external refs found!

AT4G18480 (CH42, CHLI1, CH-42,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation