Smo156007 (PACid_15405959)


Aliases : PACid_15405959

Description : 29.3.3 protein.targeting.chloroplast Encodes the ATPase subunit of the chloroplast Sec translocation machinery which plays an essential role in chloroplast biogenesis and the regulation of photosynthesis, the absence of which triggers a retrograde signal, eventually leading to a reprogramming of chloroplast and mitochondrial gene expression. Albino or Glassy Yellow 1 (AGY1) FUNCTIONS IN: ATPase activity, P-P-bond-hydrolysis-driven protein transmembrane transporter activity, ATP binding INVOLVED IN: in 6 processes EXPRESSED IN: 23 plant structures EXPRESSED DURING: 13 growth stages CONTAINS InterPro DOMAIN/s: SecA, preprotein translocase (InterPro:IPR022491), SecA motor DEAD (InterPro:IPR014018), SecA Wing/Scaffold (InterPro:IPR011116), SecA preprotein, cross-linking domain (InterPro:IPR011130), SecA DEAD-like (InterPro:IPR011115), SecA conserved site (InterPro:IPR020937), SecA protein (InterPro:IPR000185) BEST Arabidopsis thaliana protein match is: Preprotein translocase SecA family protein (TAIR:AT1G21650.1). & (loc_os01g21820.1 : 1301.0


Gene families : OG_01_0001773 (Gene family) Phylogenetic Tree(s): OG0001773_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo156007
Cluster HCCA cluster: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AT1G21650 SECA2 Preprotein translocase SecA family protein 0.04 Gene family
AT4G01800 SECA1, AtcpSecA, AGY1 Albino or Glassy Yellow 1 0.05 Gene family
Cpa|evm.model.tig00000219.51 No alias 29.3.3 protein.targeting.chloroplast Encodes the ATPase... 0.03 Gene family
Cre12.g517900 No alias 29.3.3 protein.targeting.chloroplast Encodes the ATPase... 0.06 Gene family
GSVIVT01008813001 No alias 29.3.3 protein.targeting.chloroplast Encodes a component... 0.02 Gene family
GSVIVT01028249001 No alias 29.3.3 protein.targeting.chloroplast Encodes the ATPase... 0.06 Gene family
LOC_Os01g21820 Os01g0321300 29.3.3 protein.targeting.chloroplast Encodes the ATPase... 0.04 Gene family
LOC_Os11g08980 Os11g0195100 29.3.3 protein.targeting.chloroplast Encodes a component... 0.02 Gene family
Solyc01g080840.3.1 Solyc01g080840.3 29.3.3 protein.targeting.chloroplast Encodes the ATPase... 0.07 Gene family
Zm00001d004707 GRMZM2G090020,... 29.3.3 protein.targeting.chloroplast Encodes a component... 0.03 Gene family
Zm00001d040686 GRMZM5G880102 29.3.3 protein.targeting.chloroplast Encodes the ATPase... 0.05 Gene family

Type GO Term Name Evidence Source
BP GO:0017038 protein import IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011130 SecA_preprotein_X-link_dom 199 305
No external refs found!