AT4G18130 (PHYE)


Aliases : PHYE

Description : phytochrome E


Gene families : OG_01_0000908 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000908_tree ,
OG_02_0000972 (LandPlants) Phylogenetic Tree(s): OG_02_0000972_tree ,
OG_03_0004471 (SeedPlants) Phylogenetic Tree(s): OG_03_0004471_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G18130
Cluster HCCA: Cluster_217

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g19590.1 No alias phytochrome photoreceptor (PHY). temperature sensor... 0.05 Archaeplastida
Solyc01g059870.4.1 No alias phytochrome photoreceptor (PHY). temperature sensor... 0.03 Archaeplastida
Solyc07g045480.3.1 No alias phytochrome photoreceptor (PHY) 0.04 Archaeplastida
Solyc10g044670.3.1 No alias phytochrome photoreceptor (PHY) 0.04 Archaeplastida
LOC_Os03g19590.1 No alias phytochrome photoreceptor (PHY). temperature sensor... 0.02 LandPlants
LOC_Os03g54084.1 No alias phytochrome photoreceptor (PHY) 0.02 LandPlants
Pp3c25_2610V3.1 No alias phytochrome B 0.02 LandPlants
Solyc10g044670.3.1 No alias phytochrome photoreceptor (PHY) 0.04 LandPlants
LOC_Os03g19590.1 No alias phytochrome photoreceptor (PHY). temperature sensor... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004673 protein histidine kinase activity ISS Interproscan
MF GO:0004871 obsolete signal transducer activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
BP GO:0006346 DNA methylation-dependent heterochromatin assembly RCA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated ISS Interproscan
MF GO:0008020 G protein-coupled photoreceptor activity ISS Interproscan
BP GO:0010155 regulation of proton transport RCA Interproscan
BP GO:0016246 RNA interference RCA Interproscan
BP GO:0046777 protein autophosphorylation RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR013767 PAS_fold 598 716
IPR013767 PAS_fold 732 853
IPR003594 HATPase_C 982 1091
IPR003661 HisK_dim/P 875 934
IPR013654 PAS_2 65 184
IPR003018 GAF 217 387
IPR013515 Phytochrome_cen-reg 400 576
No external refs found!