AT4G18030

Description : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

Gene families : OG_01_0000696 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000696_tree ,
OG_02_0003292 (LandPlants) Phylogenetic Tree(s): OG_02_0003292_tree ,
OG_03_0002138 (SeedPlants) Phylogenetic Tree(s): OG_03_0002138_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G18030
Cluster	HCCA: Cluster_245

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01013233001	No alias	Probable methyltransferase PMT14 OS=Arabidopsis thaliana	0.1	Archaeplastida
GSVIVT01013577001	No alias	Probable methyltransferase PMT19 OS=Arabidopsis thaliana	0.04	Archaeplastida
GSVIVT01019997001	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana	0.09	Archaeplastida
GSVIVT01027513001	No alias	Probable methyltransferase PMT15 OS=Arabidopsis thaliana	0.03	Archaeplastida
LOC_Os02g45310.1	No alias	Probable methyltransferase PMT15 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os04g48230.1	No alias	Probable methyltransferase PMT15 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os09g24900.1	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana...	0.05	Archaeplastida
LOC_Os10g36690.4	No alias	Probable methyltransferase PMT18 OS=Arabidopsis thaliana...	0.06	Archaeplastida
MA_10430815g0020	No alias	Probable methyltransferase PMT17 OS=Arabidopsis thaliana...	0.08	Archaeplastida
MA_9138363g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_9992039g0010	No alias	Probable methyltransferase PMT17 OS=Arabidopsis thaliana...	0.04	Archaeplastida
Pp3c1_20010V3.1	No alias	S-adenosyl-L-methionine-dependent methyltransferases...	0.07	Archaeplastida
Solyc05g007490.3.1	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana...	0.06	Archaeplastida
Solyc06g069870.3.1	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc08g013740.4.1	No alias	Probable methyltransferase PMT18 OS=Arabidopsis thaliana...	0.03	Archaeplastida
Solyc08g077240.3.1	No alias	Probable methyltransferase PMT14 OS=Arabidopsis thaliana...	0.07	Archaeplastida
Zm00001e004383_P001	No alias	Probable methyltransferase PMT18 OS=Arabidopsis thaliana...	0.1	Archaeplastida
Zm00001e023221_P002	No alias	Probable methyltransferase PMT15 OS=Arabidopsis thaliana...	0.05	Archaeplastida
Zm00001e034120_P001	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana...	0.06	Archaeplastida
GSVIVT01013233001	No alias	Probable methyltransferase PMT14 OS=Arabidopsis thaliana	0.1	LandPlants
GSVIVT01019997001	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana	0.08	LandPlants
LOC_Os09g24900.1	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana...	0.05	LandPlants
Solyc05g007490.3.1	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana...	0.05	LandPlants
Solyc08g077240.3.1	No alias	Probable methyltransferase PMT14 OS=Arabidopsis thaliana...	0.06	LandPlants
Zm00001e034120_P001	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana...	0.04	LandPlants
GSVIVT01013233001	No alias	Probable methyltransferase PMT14 OS=Arabidopsis thaliana	0.08	SeedPlants
GSVIVT01019997001	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana	0.06	SeedPlants
LOC_Os09g24900.1	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana...	0.05	SeedPlants
Solyc05g007490.3.1	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana...	0.05	SeedPlants
Solyc06g069870.3.1	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana...	0.02	SeedPlants
Solyc08g077240.3.1	No alias	Probable methyltransferase PMT14 OS=Arabidopsis thaliana...	0.06	SeedPlants
Zm00001e034120_P001	No alias	Probable methyltransferase PMT2 OS=Arabidopsis thaliana...	0.04	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005618	cell wall	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	ISM	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
BP	GO:0006081	cellular aldehyde metabolic process	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006090	pyruvate metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006644	phospholipid metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0008654	phospholipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009240	isopentenyl diphosphate biosynthetic process	None	Extended
CC	GO:0009505	plant-type cell wall	IDA	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
BP	GO:0019288	isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway	RCA	Interproscan
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019682	glyceraldehyde-3-phosphate metabolic process	None	Extended
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
CC	GO:0030312	external encapsulating structure	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0042546	cell wall biogenesis	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044085	cellular component biogenesis	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046490	isopentenyl diphosphate metabolic process	None	Extended
BP	GO:0071554	cell wall organization or biogenesis	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004159	Put_SAM_MeTrfase	94	600

External Links

No external refs found!

AT4G18030

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation