AT4G17905 (ATL4H)


Aliases : ATL4H

Description : RING/U-box superfamily protein


Gene families : OG_01_0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000003 (LandPlants) Phylogenetic Tree(s): OG_02_0000003_tree ,
OG_03_0001298 (SeedPlants) Phylogenetic Tree(s): OG_03_0001298_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT4G17905
Cluster HCCA: Cluster_261

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G15100 RHA2A RING-H2 finger A2A 0.04 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G17450 RHA3A RING-H2 finger A3A 0.04 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G03550 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G43430 No alias RING/U-box superfamily protein 0.06 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G41400 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G41450 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G53110 No alias RING/U-box superfamily protein 0.05 Archaeplastida
Cpa|evm.model.tig00020629.137 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01000015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01000538001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01007793001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.09 Archaeplastida
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01024698001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01028038001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14312 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14821 No alias RHA2 signal transducer of abscisic acid perception 0.02 Archaeplastida
Gb_15297 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_20844 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g15110.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g45710.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os02g46340.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g49000.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g06150.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g07100.2 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os07g06560.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os08g34550.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os08g37760.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os08g38460.1 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g30160.1 No alias ubiquitin protein ligase (XERICO) 0.04 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os10g39770.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_10208579g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10260361g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
MA_10427748g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_105610g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_159453g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_308999g0010 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_786911g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_8556123g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_8710804g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_904294g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c22_17730V3.1 No alias RING/U-box superfamily protein 0.05 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.02 Archaeplastida
Pp3c6_19030V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c9_3390V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo441685 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g100100.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc02g067700.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc02g086950.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.09 Archaeplastida
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.08 Archaeplastida
Solyc08g082680.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc09g010650.1.1 No alias RING-H2 finger protein ATL33 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003126_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.1 Archaeplastida
Zm00001e010029_P001 No alias ubiquitin protein ligase (XERICO) 0.03 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e015259_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e016470_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e019438_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e020958_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e034421_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e036289_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e036691_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AMTR_s00129p00065710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AT1G04360 No alias RING/U-box superfamily protein 0.05 LandPlants
AT2G42360 No alias RING/U-box superfamily protein 0.03 LandPlants
AT3G03550 No alias RING/U-box superfamily protein 0.05 LandPlants
GSVIVT01009096001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01024698001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
GSVIVT01028038001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
Gb_20461 No alias RING-H2-class E3 ligase 0.03 LandPlants
Gb_20844 No alias no hits & (original description: none) 0.02 LandPlants
Gb_32878 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
MA_10427748g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_569551g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_8609304g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_8710804g0010 No alias no hits & (original description: none) 0.02 LandPlants
MA_904294g0010 No alias RING-H2-class E3 ligase 0.03 LandPlants
MA_9143538g0010 No alias no hits & (original description: none) 0.02 LandPlants
Smo39820 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Smo8844 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Solyc01g066430.3.1 No alias RING-H2-class E3 ligase 0.02 LandPlants
Solyc01g081040.4.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc01g088440.2.1 No alias no hits & (original description: none) 0.02 LandPlants
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.09 LandPlants
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.08 LandPlants
Solyc09g066300.3.1 No alias RING-H2-class E3 ligase 0.03 LandPlants
Solyc09g089890.1.1 No alias RING-H2-class E3 ligase 0.04 LandPlants
Solyc12g094690.1.1 No alias RING-H2 finger protein ATL8 OS=Arabidopsis thaliana... 0.03 LandPlants
Zm00001e002272_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.09 LandPlants
Zm00001e016474_P001 No alias RING-H2-class E3 ligase 0.02 LandPlants
Zm00001e019438_P001 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 LandPlants
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.04 LandPlants
AT3G03550 No alias RING/U-box superfamily protein 0.04 SeedPlants
Solyc06g061250.3.1 No alias RING-H2-class E3 ligase 0.08 SeedPlants
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.07 SeedPlants
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.08 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 154 197
No external refs found!