AT4G17616

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG_01_0001060 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001060_tree ,
OG_02_0001470 (LandPlants) Phylogenetic Tree(s): OG_02_0001470_tree ,
OG_03_0012025 (SeedPlants) Phylogenetic Tree(s): OG_03_0012025_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT4G17616
Cluster	HCCA: Cluster_88

Target	Alias	Description	ECC score	Gene Family Method
LOC_Os01g57900.1	No alias	Pentatricopeptide repeat-containing protein At1g69290...	0.01	Archaeplastida
MA_118036g0010	No alias	Pentatricopeptide repeat-containing protein At1g03100,...	0.03	Archaeplastida
Smo105853	No alias	Pentatricopeptide repeat-containing protein At3g09650,...	0.02	Archaeplastida
Solyc01g088750.3.1	No alias	Pentatricopeptide repeat-containing protein At1g69290...	0.02	Archaeplastida
MA_118036g0010	No alias	Pentatricopeptide repeat-containing protein At1g03100,...	0.02	LandPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	416	440
IPR002885	Pentatricopeptide_repeat	447	476

External Links

No external refs found!