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  5. Len_g37208

Len_g37208 (SC35, ATSC35, At-SC35)


Aliases : SC35, ATSC35, At-SC35

Description : not classified & original description: none


Gene families : OG0001818 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001818_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g37208

Target Alias Description ECC score Gene Family Method Actions
AT5G64200 SC35, ATSC35, At-SC35 ortholog of human splicing factor SC35 0.02 OrthoFinder output from all 47 species
Cba_g76818 SC35, ATSC35, At-SC35 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10426661g0020 SC35, ATSC35, At-SC35 Serine/arginine-rich splicing factor SC35 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Pir_g03028 SC35, ATSC35, At-SC35 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035299 inositol pentakisphosphate 2-kinase activity IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 19 78
No external refs found!