Smo153173 (PACid_15420523)


Aliases : PACid_15420523

Description : 29.5.11.5 protein.degradation.ubiquitin.ubiquitin protease Encodes a nuclear ubiquitin-specific protease. ubiquitin-specific protease 3 (UBP3) CONTAINS InterPro DOMAIN/s: Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, conserved site (InterPro:IPR018200), Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2 (InterPro:IPR001394) BEST Arabidopsis thaliana protein match is: ubiquitin-specific protease 4 (TAIR:AT2G22310.1) Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12 Bacteria - 1396 Metazoa - 17338 Fungi - 3422 Plants - 5037 Viruses - 0 Other Eukaryotes - 2996 (source: NCBI BLink). & (loc_os04g37950.1 : 553.0


Gene families : OG_01_0001820 (Gene family) Phylogenetic Tree(s): OG0001820_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo153173
Cluster HCCA cluster: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00020554.78 No alias 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.01 Gene family
Solyc04g056290.3.1 Solyc04g056290.3 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.02 Gene family
Zm00001d003476 GRMZM2G049568 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.02 Gene family
Zm00001d016918 GRMZM2G072146 29.5.11.5 protein.degradation.ubiquitin.ubiquitin... 0.04 Gene family

Type GO Term Name Evidence Source
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001394 Peptidase_C19_UCH 23 361
No external refs found!