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Description : not classified & original description: none
Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00264660 | ATERF3, ERF3,... | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00010p00098700 | ERF110,... | RNA biosynthesis.transcriptional activation.AP2/ERF... | 0.02 | OrthoFinder output from all 47 species | |
| AT1G71520 | No alias | Integrase-type DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G23240 | ERF1, ATERF1 | ethylene response factor 1 | 0.02 | OrthoFinder output from all 47 species | |
| AT4G13620 | No alias | Integrase-type DNA-binding superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G17500 | ERF-1, ATERF-1 | ethylene responsive element binding factor 1 | 0.04 | OrthoFinder output from all 47 species | |
| AT5G19790 | RAP2.11 | related to AP2 11 | 0.03 | OrthoFinder output from all 47 species | |
| Als_g06158 | No alias | subgroup ERF-V transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.38G054800.1 | TINY2, Ceric.38G054800 | subgroup ERF-III transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07566 | DEAR1, CEJ1, ATERF#011 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g23015 | ERF38, ATERF38 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g00794 | ORA47 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g40150.1 | WIN1, SHN1,... | transcription factor (ERF). SHN-type cutin and suberin... | 0.02 | OrthoFinder output from all 47 species | |
| Len_g09395 | No alias | subgroup ERF-X transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g57821 | Rap2.6L | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_10209922g0010 | No alias | transcription factor (DREB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_904750g0010 | No alias | transcription factor (DREB) | 0.02 | OrthoFinder output from all 47 species | |
| MA_9068995g0010 | No alias | Ethylene-responsive transcription factor ERF016... | 0.02 | OrthoFinder output from all 47 species | |
| Msp_g08368 | ERF-1, ATERF-1 | subgroup ERF-IX transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g12325 | No alias | subgroup ERF-III transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g21797 | ERF-1, ATERF-1 | subgroup ERF-IX transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0036.g011575 | DEAR1, CEJ1, ATERF#011 | not classified & original description: CDS=1-717 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g116610.3.1 | WIN1, SHN1,... | transcription factor (ERF). SHN-type cutin and suberin... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g08637 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014008_P002 | WIN1, SHN1,... | transcription factor (ERF). SHN-type cutin and suberin... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e036130_P001 | RAP2.4, Zm00001e036130 | transcription factor (DREB) | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000154 | rRNA modification | IEP | HCCA |
| BP | GO:0001510 | RNA methylation | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| MF | GO:0008170 | N-methyltransferase activity | IEP | HCCA |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008649 | rRNA methyltransferase activity | IEP | HCCA |
| MF | GO:0008757 | S-adenosylmethionine-dependent methyltransferase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| MF | GO:0016436 | rRNA (uridine) methyltransferase activity | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| BP | GO:0031167 | rRNA methylation | IEP | HCCA |
| BP | GO:0032259 | methylation | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043414 | macromolecule methylation | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0051259 | protein complex oligomerization | IEP | HCCA |
| BP | GO:0051260 | protein homooligomerization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| MF | GO:0070042 | rRNA (uridine-N3-)-methyltransferase activity | IEP | HCCA |
| BP | GO:0070475 | rRNA base methylation | IEP | HCCA |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | HCCA |
| MF | GO:0140102 | catalytic activity, acting on a rRNA | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |