Smo150191 (PACid_15411806)


Aliases : PACid_15411806

Description : 27.2 RNA.transcription Encodes RNA-dependent RNA polymerase. While not required for virus-induced post-transcriptional gene silencing (PTGS), it can promote turnover of viral RNAs in infected plants. Nomenclature according to Xie, et al. (2004). Involved in the production of Cucumber Mosaic Virus siRNAs. RNA-dependent RNA polymerase 1 (RDR1) CONTAINS InterPro DOMAIN/s: RNA-dependent RNA polymerase, eukaryotic-type (InterPro:IPR007855) BEST Arabidopsis thaliana protein match is: RNA-dependent RNA polymerase 2 (TAIR:AT4G11130.1) Has 638 Blast hits to 623 proteins in 115 species: Archae - 0 Bacteria - 2 Metazoa - 73 Fungi - 286 Plants - 205 Viruses - 2 Other Eukaryotes - 70 (source: NCBI BLink). & (loc_os02g50330.1 : 691.0


Gene families : OG_01_0001939 (Gene family) Phylogenetic Tree(s): OG0001939_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo150191
Cluster HCCA cluster: Cluster_70


Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 118 678
No external refs found!