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  5. Len_g36072

Len_g36072


Description : E3 ubiquitin ligase *(RGLG) & original description: none


Gene families : OG0000455 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000455_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g36072

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00153710 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Aev_g33551 RGLG2 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13446 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18014 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62084 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.09 OrthoFinder output from all 47 species
Aob_g11094 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14222 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0015.g014034 No alias E3 ubiquitin ligase *(RGLG) & original description: CDS=347-1108 0.04 OrthoFinder output from all 47 species
Cba_g34651 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74655 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g76335 RGLG2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z003900.1 RGLG1, Ceric.1Z003900 E3 ubiquitin ligase *(RGLG) & original description:... 0.05 OrthoFinder output from all 47 species
Dcu_g12405 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g50282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os06g40650.1 RGLG2, LOC_Os06g40650 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species
Lfl_g25618 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37971 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.05 OrthoFinder output from all 47 species
Mp6g16390.1 RGLG2 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species
Mp6g16430.1 RGLG2 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species
Msp_g30852 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.07 OrthoFinder output from all 47 species
Msp_g46900 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g17342 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g06814 RGLG1 E3 ubiquitin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08521 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g55605 No alias E3 ubiquitin ligase *(RGLG) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14996 No alias E3 ubiquiTin ligase *(RGLG) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e029296_P001 Zm00001e029296 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.04 OrthoFinder output from all 47 species
Zm00001e030550_P001 RGLG2, Zm00001e030550 RING-HC-class E3 ligase. ligating E3 protein (RGLG) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR010734 Copine_C 49 258
No external refs found!