Smo148275 (PACid_15406326)


Aliases : PACid_15406326

Description : 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING domain ligase2 (RGLG2) CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Copine (InterPro:IPR010734), von Willebrand factor, type A (InterPro:IPR002035) BEST Arabidopsis thaliana protein match is: RING domain ligase1 (TAIR:AT3G01650.1) Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798 Bacteria - 22429 Metazoa - 974 Fungi - 991 Plants - 531 Viruses - 0 Other Eukaryotes - 9610 (source: NCBI BLink). & (chl4|526075 : 354.0


Gene families : OG_01_0000706 (Gene family) Phylogenetic Tree(s): OG0000706_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo148275
Cluster HCCA cluster: Cluster_190

Target Alias Description ECC score Gene Family Method Actions
AT1G67800 No alias Copine (Calcium-dependent phospholipid-binding protein) family 0.05 Gene family
GSVIVT01002586001 No alias 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING... 0.02 Gene family
GSVIVT01026456001 No alias No description available 0.03 Gene family
LOC_Os01g68060 Os01g0908700 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING... 0.05 Gene family
Solyc03g111870.3.1 Solyc03g111870.3 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING... 0.02 Gene family
Solyc05g053870.3.1 Solyc05g053870.3 No description available 0.04 Gene family
Zm00001d011821 GRMZM2G118265 No description available 0.02 Gene family
Zm00001d012101 GRMZM2G065893 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING... 0.02 Gene family
Zm00001d036831 GRMZM2G071659 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING... 0.06 Gene family
Zm00001d042437 GRMZM2G077809 29.5.11.4.2 protein.degradation.ubiquitin.E3.RING RING... 0.04 Gene family

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR010734 Copine 92 303
No external refs found!