Len_g34881

Description : component *(bL35c) of large plastid ribosomal-subunit proteome & original description: none

Gene families : OG0006536 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006536_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Len_g34881

Target	Alias	Description	ECC score	Gene Family Method
Aop_g18112	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
Cba_g00423	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.03	OrthoFinder output from all 47 species
GSVIVT01012561001	No alias	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Len_g09835	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.05	OrthoFinder output from all 47 species
Mp5g05850.1	No alias	component psRPL35 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Pir_g14080	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0053.g014110	No alias	component *(bL35c) of large plastid ribosomal-subunit...	0.04	OrthoFinder output from all 47 species
Smo444022	No alias	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
Solyc07g006000.3.1	Solyc07g006000	component psRPL35 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species
Zm00001e037448_P001	Zm00001e037448	component psRPL35 of large ribosomal subunit proteome	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005507	copper ion binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR021137	Ribosomal_L35	112	170

External Links

No external refs found!

Len_g34881

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation