Smo146656 (PACid_15403432)


Aliases : PACid_15403432

Description : 29.2.1.2.2.32 protein.synthesis.ribosomal protein.eukaryotic.60S subunit.L32 Ribosomal protein L32e FUNCTIONS IN: structural constituent of ribosome INVOLVED IN: translation, ribosome biogenesis LOCATED IN: cytosolic ribosome, ribosome, cytosolic large ribosomal subunit, nucleolus EXPRESSED IN: callus, pollen tube, leaf CONTAINS InterPro DOMAIN/s: Ribosomal protein L32e (InterPro:IPR001515), Ribosomal protein L32e, conserved site (InterPro:IPR018263) BEST Arabidopsis thaliana protein match is: Ribosomal protein L32e (TAIR:AT5G46430.2) Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0 Bacteria - 0 Metazoa - 736 Fungi - 347 Plants - 385 Viruses - 0 Other Eukaryotes - 339 (source: NCBI BLink). & (chl4|523676 : 171.0


Gene families : OG_01_0002056 (Gene family) Phylogenetic Tree(s): OG0002056_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Smo146656
Cluster HCCA cluster: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT4G18100 No alias Ribosomal protein L32e 0.2 Gene family
AT5G46430 No alias Ribosomal protein L32e 0.12 Gene family
Cpa|evm.model.tig00020554.140 No alias 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.15 Gene family
Cre06.g289550 No alias 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.25 Gene family
GSVIVT01005150001 No alias 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.08 Gene family
GSVIVT01021377001 No alias 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.17 Gene family
LOC_Os08g41300 Os08g0524600 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.12 Gene family
LOC_Os09g32500 Os09g0501200 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.14 Gene family
LOC_Os09g32520 Os09g0501700 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.06 Gene family
LOC_Os09g32532 Os09g0502000 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.11 Gene family
MA_10434621g0010 No alias 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.03 Gene family
MA_41569g0010 No alias 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.1 Gene family
Solyc02g070310.3.1 Solyc02g070310.3 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.15 Gene family
Solyc08g006900.3.1 Solyc08g006900.3 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.16 Gene family
Zm00001d006064 GRMZM2G047971 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.14 Gene family
Zm00001d021018 GRMZM2G065868 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.17 Gene family
Zm00001d021020 GRMZM2G115901 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.16 Gene family
Zm00001d031560 No alias 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.12 Gene family
Zm00001d049790 GRMZM2G155931 29.2.1.2.2.32 protein.synthesis.ribosomal... 0.15 Gene family

Type GO Term Name Evidence Source
CC GO:0005622 intracellular IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001515 Ribosomal_L32e 16 122
No external refs found!