Len_g33974


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g33974

Target Alias Description ECC score Gene Family Method Actions
AT1G47580 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g004418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g005800 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g015699 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g066083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20047 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g04109 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g12481 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24718 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g32458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38335 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62749 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02659 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16640 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17427 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0251.g060294 No alias not classified & original description: CDS=1-879 0.03 OrthoFinder output from all 47 species
Cba_g06916 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g17429 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29359 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29874 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29882 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24393 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30454 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43258 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17093 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36401 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033190001 OTP82 Pentatricopeptide repeat-containing protein At5g66520... 0.02 OrthoFinder output from all 47 species
Len_g03404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g05159 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17972 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g38083 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g43648 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g44140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g55705 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07093 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12624 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g13946 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14903 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g34604 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37426 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g04242 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g22363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28692 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g09916 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13275 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33886 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34280 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02838 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63257 RARE1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g12264 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30997 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g04331 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16549 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24227 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo86032 No alias Pentatricopeptide repeat-containing protein At5g40410,... 0.02 OrthoFinder output from all 47 species
Smo92231 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.02 OrthoFinder output from all 47 species
Solyc01g049810.4.1 Solyc01g049810 Pentatricopeptide repeat-containing protein At5g56310... 0.03 OrthoFinder output from all 47 species
Solyc02g069500.1.1 Solyc02g069500 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
Solyc04g076800.3.1 CRR22, Solyc04g076800 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Solyc07g006990.3.1 Solyc07g006990 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc07g009220.2.1 Solyc07g009220 Pentatricopeptide repeat-containing protein At2g34400... 0.03 OrthoFinder output from all 47 species
Tin_g06389 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 83 130
IPR002885 Pentatricopeptide_repeat 59 79
No external refs found!