- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Aliases : OTP84
Description : ssDNA-binding protein *(OSB) & original description: none
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00002p00270380 | OTP86,... | RNA processing.organelle machineries.RNA... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G06140 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G33680 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G39620 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| AT3G49142 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT3G53360 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g003796 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g015421 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g066584 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g079818 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g12943 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g16565 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g17592 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g19188 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ala_g23793 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26222 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g31160 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g36200 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g05235 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Aop_g16838 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene54625.t1 | Aspi01Gene54625 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0001.g000793 | No alias | not classified & original description: CDS=1-2415 | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0069.g036581 | No alias | not classified & original description: CDS=1-1653 | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g05949 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g76220 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.07G000400.1 | Ceric.07G000400 | not classified & original description: pacid=50627195... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.38G035700.1 | Ceric.38G035700 | not classified & original description: pacid=50579678... | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g04194 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g08356 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09065 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g09764 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g21461 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g23537 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g25263 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30279 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g30484 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g30493 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g31776 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g32635 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g33014 | EMB2261 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g36005 | CRR2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g36032 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g39373 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g43221 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g44824 | OTP84 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g05754 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g08966 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g16678 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g36116 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g39841 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dcu_g45932 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g04371 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Dde_g05938 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g15722 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g22314 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g28695 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g46329 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g51270 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g07052 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g26370 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g29335 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01000420001 | MEF22 | RNA processing.organelle machineries.RNA... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01004939001 | RARE1 | RNA processing.organelle machineries.RNA... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01007974001 | No alias | Pentatricopeptide repeat-containing protein At5g61400... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01008656001 | No alias | Pentatricopeptide repeat-containing protein At5g50990... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01008757001 | No alias | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01011501001 | No alias | Pentatricopeptide repeat-containing protein At5g39350... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01015468001 | No alias | Pentatricopeptide repeat-containing protein At1g31430... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01021774001 | No alias | Pentatricopeptide repeat-containing protein At4g20770... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01027525001 | LPA66 | Pentatricopeptide repeat-containing protein At4g21065... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01030080001 | No alias | RNA processing.organelle machineries.RNA... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01035491001 | No alias | Pentatricopeptide repeat-containing protein At4g33170... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035618001 | No alias | Pentatricopeptide repeat-containing protein At3g09040,... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01036943001 | LPA66 | Pentatricopeptide repeat-containing protein At5g48910... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01037332001 | CRR22 | Pentatricopeptide repeat-containing protein At1g20230... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01038381001 | No alias | Pentatricopeptide repeat-containing protein At4g02750... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_10113 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33726 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.04 | OrthoFinder output from all 47 species | |
| Gb_36806 | EMB2261 | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g63260.3 | LOC_Os03g63260 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os05g45850.1 | LOC_Os05g45850 | Pentatricopeptide repeat-containing protein At4g33170... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os07g10400.1 | CRR22, LOC_Os07g10400 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os08g25280.1 | LOC_Os08g25280 | Pentatricopeptide repeat-containing protein At4g39530... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g03238 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g09279 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g07126 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07641 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g07842 | DOT4 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g17711 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g28067 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429069g0010 | CRR22 | Pentatricopeptide repeat-containing protein DOT4,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_38395g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_465411g0010 | CRR22 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species | |
| MA_511569g0010 | No alias | Pentatricopeptide repeat-containing protein At2g27610... | 0.03 | OrthoFinder output from all 47 species | |
| MA_597g0020 | DOT4 | Pentatricopeptide repeat-containing protein At4g02750... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g03574 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g21026 | No alias | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Msp_g33983 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g34466 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g10306 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g19382 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g29175 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g30175 | PTAC9, OSB2 | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g37890 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g02551 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g11835 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g12230 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g12598 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g12988 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g13001 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g13014 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g13050 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20470 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g20517 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g56915 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g57697 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g57944 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57995 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g57996 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g61389 | OTP86 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g66342 | OTP84 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g20675 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g05328 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g22251 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g32992 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g36007 | CRR22 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g39647 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g54901 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g59292 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g61335 | EMB2758 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0013.g005911 | EMB2758 | not classified & original description: CDS=1-2163 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0050.g013864 | CRR22 | not classified & original description: CDS=1-2397 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0085.g018377 | REME1 | not classified & original description: CDS=1-1548 | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0086.g018386 | VAC1, ECB2, ATECB2 | not classified & original description: CDS=1-2118 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g02496 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g13514 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo173139 | VAC1, ECB2, ATECB2 | Pentatricopeptide repeat-containing protein At4g13650... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g116840.3.1 | Solyc03g116840 | RNA editing factor (OTP81) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc07g053520.2.1 | SLO1, Solyc07g053520 | Putative pentatricopeptide repeat-containing protein... | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g009950.4.1 | Solyc09g009950 | RNA editing factor (MEF10) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g06411 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g06871 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g09924 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g14336 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g14604 | No alias | not classified & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g14725 | MEF21 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g15123 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g16937 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g18963 | CRR22 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g20093 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g21770 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g22619 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23138 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g23704 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g24048 | CRR2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g25989 | CRR22 | not classified & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g26479 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g30211 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g32763 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g44844 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g45689 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g50800 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g57155 | No alias | ssDNA-binding protein *(OSB) & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g06522 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g12273 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g17467 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g19923 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g30438 | VAC1, ECB2, ATECB2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e014825_P001 | Zm00001e014825 | Pentatricopeptide repeat-containing protein At2g27610... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031693_P001 | Zm00001e031693 | Pentatricopeptide repeat-containing protein At4g14050,... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e034478_P001 | Zm00001e034478 | Pentatricopeptide repeat-containing protein At3g24000,... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e039394_P003 | Zm00001e039394 | Pentatricopeptide repeat-containing protein At5g04780,... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002885 | Pentatricopeptide_repeat | 653 | 681 |
| IPR002885 | Pentatricopeptide_repeat | 114 | 134 |
| IPR002885 | Pentatricopeptide_repeat | 216 | 239 |
| IPR002885 | Pentatricopeptide_repeat | 140 | 186 |
| IPR002885 | Pentatricopeptide_repeat | 241 | 288 |
| IPR002885 | Pentatricopeptide_repeat | 343 | 390 |
| IPR002885 | Pentatricopeptide_repeat | 548 | 596 |
| IPR002885 | Pentatricopeptide_repeat | 445 | 492 |
| IPR002885 | Pentatricopeptide_repeat | 719 | 750 |
| No external refs found! |