Len_g33479


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Len_g33479

Target Alias Description ECC score Gene Family Method Actions
AT3G09040 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g014778 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g05438 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g16831 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g15922 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30802 OTP84 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0109.g045373 No alias not classified & original description: CDS=1-2985 0.06 OrthoFinder output from all 47 species
Azfi_s0544.g076393 No alias not classified & original description: CDS=1-927 0.06 OrthoFinder output from all 47 species
Azfi_s2932.g113765 CRR22 not classified & original description: CDS=1-1710 0.06 OrthoFinder output from all 47 species
Cba_g03375 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07175 CRR22 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Cba_g20030 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.34G047900.1 Ceric.34G047900 not classified & original description: pacid=50622720... 0.06 OrthoFinder output from all 47 species
Dac_g25281 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g37952 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os01g41650.1 LOC_Os01g41650 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Len_g33765 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g44822 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56481 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g56629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38043 OSB4 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g29119 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ore_g10372 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g05328 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g03885 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g33706 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo74842 OTP86 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Smo76226 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Solyc05g013200.1.1 OTP85, Solyc05g013200 RNA editing factor (OTP85) 0.02 OrthoFinder output from all 47 species
Solyc09g007430.1.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Solyc11g065250.1.1 EMB2744, Solyc11g065250 Pentatricopeptide repeat-containing protein At5g39680... 0.04 OrthoFinder output from all 47 species
Spa_g45537 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g05621 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24821 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g39811 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43909 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 263 289
IPR002885 Pentatricopeptide_repeat 59 82
IPR002885 Pentatricopeptide_repeat 162 184
IPR002885 Pentatricopeptide_repeat 291 310
IPR002885 Pentatricopeptide_repeat 186 234
IPR002885 Pentatricopeptide_repeat 84 132
No external refs found!